RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 XYLT1Q86Y38 959 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 MFN1Q8IWA4 741 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 CCDC117Q8IWD4 279 aaPredicted RBP19.39■□□□□ 0.69
USP39-209ENST00000458268 ATP6V0D2Q8N8Y2 350 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 HJURPQ8NCD3 748 aaPredicted RBP19.39■□□□□ 0.69
USP39-209ENST00000458268 UCMAQ8WVF2 138 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 SORCS1Q8WY21 1168 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 NAP1L5Q96NT1 182 aaPredicted RBP19.39■□□□□ 0.69
USP39-209ENST00000458268 SLC2A13Q96QE2 648 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 METTL5Q9NRN9 209 aaKnown RBP19.39■□□□□ 0.69
USP39-209ENST00000458268 ABCB8Q9NUT2 735 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.39■□□□□ 0.69
USP39-209ENST00000458268 SLC12A6Q9UHW9 1150 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 DAAM1Q9Y4D1 1078 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 A0A0A0MRY4 1105 aa19.38■□□□□ 0.69
USP39-209ENST00000458268 WASH3PC4AMC7 463 aa19.38■□□□□ 0.69
USP39-209ENST00000458268 CDH5P33151 784 aaPredicted RBP19.38■□□□□ 0.69
USP39-209ENST00000458268 GGCXP38435 758 aa19.38■□□□□ 0.69
USP39-209ENST00000458268 ZNF445P59923 1031 aa19.38■□□□□ 0.69
USP39-209ENST00000458268 RPS24P62847 133 aaKnown RBP19.38■□□□□ 0.69
USP39-209ENST00000458268 NNTQ13423 1086 aa19.38■□□□□ 0.69
USP39-209ENST00000458268 PIK3R6Q5UE93 754 aa19.38■□□□□ 0.69
USP39-209ENST00000458268 RALGAPA1Q6GYQ0 2036 aa19.38■□□□□ 0.69
USP39-209ENST00000458268 CHST9Q7L1S5 443 aa19.38■□□□□ 0.69
USP39-209ENST00000458268 BEND5Q7L4P6 421 aa19.38■□□□□ 0.69
USP39-209ENST00000458268 MDGA1Q8NFP4 955 aa19.38■□□□□ 0.69
USP39-209ENST00000458268 RUBCNQ92622 972 aa19.38■□□□□ 0.69
USP39-209ENST00000458268 MYEOVQ96EZ4 313 aa19.38■□□□□ 0.69
USP39-209ENST00000458268 SLC39A13Q96H72 371 aa19.38■□□□□ 0.69
USP39-209ENST00000458268 PRICKLE1Q96MT3 831 aaPredicted RBP19.38■□□□□ 0.69
USP39-209ENST00000458268 HCN2Q9UL51 889 aa19.38■□□□□ 0.69
USP39-209ENST00000458268 STAP1Q9ULZ2 295 aa19.38■□□□□ 0.69
USP39-209ENST00000458268 SPAG17Q6Q759 2223 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 SDK1Q7Z5N4 2213 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 ZBTB24O43167 697 aaPredicted RBP19.37■□□□□ 0.69
USP39-209ENST00000458268 TACR2P21452 398 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 NOS2P35228 1153 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 NSFP46459 744 aaKnown RBP19.37■□□□□ 0.69
USP39-209ENST00000458268 FANCCQ00597 558 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 CDH18Q13634 790 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 HSF5Q4G112 596 aaPredicted RBP19.37■□□□□ 0.69
USP39-209ENST00000458268 SMYD5Q6GMV2 418 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 CIR1Q86X95 450 aaPredicted RBP19.37■□□□□ 0.69
USP39-209ENST00000458268 CACUL1Q86Y37 369 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 ZDHHC17Q8IUH5 632 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 KIAA2013Q8IYS2 634 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 WFDC5Q8TCV5 224 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 GAB3Q8WWW8 586 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 RLN3Q8WXF3 142 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.37■□□□□ 0.69
USP39-209ENST00000458268 GGA2Q9UJY4 613 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 STOML2Q9UJZ1 356 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 FBXO10Q9UK96 956 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 SLC27A6Q9Y2P4 619 aa19.37■□□□□ 0.69
USP39-209ENST00000458268 LRRC53A6NM62 1247 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 F5H5T6 163 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 GJB6O95452 261 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 FERP16591 822 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 TFE3P19532 575 aaPredicted RBP19.36■□□□□ 0.69
USP39-209ENST00000458268 HLA-FP30511 346 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 HOXA6P31267 233 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 CCR1P32246 355 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 CNR2P34972 360 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 MATKP42679 507 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 DEUP1Q05D60 604 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 FNDC3BQ53EP0 1204 aaKnown RBP19.36■□□□□ 0.69
USP39-209ENST00000458268 MS4A13Q5J8X5 152 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 SND1Q7KZF4 910 aaKnown RBP eCLIP19.36■□□□□ 0.69
USP39-209ENST00000458268 KBTBD6Q86V97 674 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 EMC1Q8N766 993 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 CYB5D2Q8WUJ1 264 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 BTN2A3PQ96KV6 586 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 PCDHB18PQ96TA0 734 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 TBCBQ99426 244 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 SLC2A11Q9BYW1 496 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 SIK2Q9H0K1 926 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 ELOVL2Q9NXB9 296 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 USP18Q9UMW8 372 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 FAM186AA6NE01 2351 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 VPS13AQ96RL7 3174 aa19.36■□□□□ 0.69
USP39-209ENST00000458268 MYO15AQ9UKN7 3530 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 A0A1B0GTH6 734 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 KCNU1A8MYU2 1149 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 H0Y626 953 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 IGLV3-25P01717 112 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 CYP1A1P04798 512 aaPredicted RBP19.35■□□□□ 0.69
USP39-209ENST00000458268 SLC2A3P11169 496 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 CHRM1P11229 460 aaPredicted RBP19.35■□□□□ 0.69
USP39-209ENST00000458268 PABPC1P11940 636 aaKnown RBP19.35■□□□□ 0.69
USP39-209ENST00000458268 CD70P32970 193 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 FLT3P36888 993 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 GABRB2P47870 512 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 ASIC2Q16515 512 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 CDO1Q16878 200 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 USP39Q53GS9 565 aaKnown RBP19.35■□□□□ 0.69
USP39-209ENST00000458268 LAIR1Q6GTX8 287 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 KIAA1324Q6UXG2 1013 aaKnown RBP19.35■□□□□ 0.69
USP39-209ENST00000458268 TRIM72Q6ZMU5 477 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 FAM160A2Q8N612 972 aaPredicted RBP19.35■□□□□ 0.69
USP39-209ENST00000458268 ZNF366Q8N895 744 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms