RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 ZNF697Q5TEC3 545 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 CCDC137Q6PK04 289 aaKnown RBP9.05□□□□□ -0.96
RIF1-208ENST00000457745 MON1AQ86VX9 555 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 CIR1Q86X95 450 aaPredicted RBP9.05□□□□□ -0.96
RIF1-208ENST00000457745 MIB1Q86YT6 1006 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 UNC45BQ8IWX7 931 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 TAB3Q8N5C8 712 aaPredicted RBP9.05□□□□□ -0.96
RIF1-208ENST00000457745 KREMEN2Q8NCW0 462 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 RNF139Q8WU17 664 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 MYRFLQ96LU7 910 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 GDAP1L1Q96MZ0 367 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 CYP2S1Q96SQ9 504 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 OXCT2Q9BYC2 517 aaPredicted RBP9.05□□□□□ -0.96
RIF1-208ENST00000457745 UBE2OQ9C0C9 1292 aaKnown RBP9.05□□□□□ -0.96
RIF1-208ENST00000457745 NOL6Q9H6R4 1146 aaKnown RBP9.05□□□□□ -0.96
RIF1-208ENST00000457745 LRRC4CQ9HCJ2 640 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 AAASQ9NRG9 546 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 ABCC13Q9NSE7 274 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 PCYOX1Q9UHG3 505 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 LZTS1Q9Y250 596 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 SNX24Q9Y343 169 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.05□□□□□ -0.96
RIF1-208ENST00000457745 PCDHA11Q9Y5I1 949 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 HS3ST4Q9Y661 456 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 SHROOM3Q8TF72 1996 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 SLC12A8A0AV02 714 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 CCDC188H7C350 402 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 DYNC1I1O14576 645 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 PRRG1O14668 218 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 CREB3O43889 395 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 TLR5O60602 858 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 SASH3O75995 380 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 CNTN5O94779 1100 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 LRIG2O94898 1065 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 RTN3O95197 1032 aaPredicted RBP9.04□□□□□ -0.96
RIF1-208ENST00000457745 OAS1P00973 400 aaKnown RBP9.04□□□□□ -0.96
RIF1-208ENST00000457745 KLRC2P26717 231 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 SLC6A4P31645 630 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 RPL21P46778 160 aaKnown RBP9.04□□□□□ -0.96
RIF1-208ENST00000457745 VPS41P49754 854 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 NUMBP49757 651 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 VCPP55072 806 aaKnown RBP9.04□□□□□ -0.96
RIF1-208ENST00000457745 COPS2P61201 443 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 DR1Q01658 176 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 SMARCB1Q12824 385 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 CCNG2Q16589 344 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 C10orf120Q5SQS8 335 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 DUPD1Q68J44 220 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 TXNDC8Q6A555 127 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 ARHGAP36Q6ZRI8 547 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 RBM23Q86U06 439 aaKnown RBP9.04□□□□□ -0.96
RIF1-208ENST00000457745 ARHGAP12Q8IWW6 846 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 GPR65Q8IYL9 337 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 TNS4Q8IZW8 715 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 GPR161Q8N6U8 529 aaKnown RBP9.04□□□□□ -0.96
RIF1-208ENST00000457745 C12orf76Q8N812 135 aaPredicted RBP9.04□□□□□ -0.96
RIF1-208ENST00000457745 SHKBP1Q8TBC3 707 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 ARNTL2Q8WYA1 636 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 SEC14L1Q92503 715 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 IGSF8Q969P0 613 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 PSMG2Q969U7 264 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 ZNF707Q96C28 371 aaPredicted RBP9.04□□□□□ -0.96
RIF1-208ENST00000457745 ZNF419Q96HQ0 510 aaPredicted RBP9.04□□□□□ -0.96
RIF1-208ENST00000457745 RPGRIP1Q96KN7 1286 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 PRMT1Q99873 361 aaKnown RBP9.04□□□□□ -0.96
RIF1-208ENST00000457745 ZNF670Q9BS34 389 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 TMEM121Q9BTD3 319 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 SMG9Q9H0W8 520 aaKnown RBP9.04□□□□□ -0.96
RIF1-208ENST00000457745 PRO3102Q9H379 93 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 FBXO44Q9H4M3 255 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 SLITRK6Q9H5Y7 841 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 EPB41L5Q9HCM4 733 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 SMPD4Q9NXE4 827 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 MARCH2Q9P0N8 246 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 ZNF212Q9UDV6 495 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 LCMT1Q9UIC8 334 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 HCFC2Q9Y5Z7 792 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 IRAK3Q9Y616 596 aa9.04□□□□□ -0.96
RIF1-208ENST00000457745 H3BNC9 293 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 TRDMT1O14717 391 aaKnown RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 APOL1O14791 398 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 LINC01565O15544 149 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 HRO43593 1189 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 GLP2RO95838 553 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 ERCC2P18074 760 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 CHRNA3P32297 505 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 FNTAP49354 379 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 TUFMP49411 452 aaKnown RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 TBX4P57082 545 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 PDK2Q15119 407 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 TRIP4Q15650 581 aaPredicted RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 ALFQ53S48 1182 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 FAM133BQ5BKY9 247 aaKnown RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 MS4A13Q5J8X5 152 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 SNX30Q5VWJ9 437 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 RAP1GAP2Q684P5 730 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 WDR93Q6P2C0 686 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 CCNI2Q6ZMN8 369 aaPredicted RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 RFX8Q6ZV50 586 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 ZC3H18Q86VM9 953 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms