RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 LHX5Q9H2C1 402 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 DKK4Q9UBT3 224 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 NUDT5Q9UKK9 219 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 RCOR1Q9UKL0 485 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 AGO1Q9UL18 857 aaKnown RBP8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 GPSM3Q9Y4H4 160 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 PLXNB3Q9ULL4 1909 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 SLC12A8A0AV02 714 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 E9PAM4 449 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 TAF4O00268 1085 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 RHOBTB3O94955 611 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 ZBED1O96006 694 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 CAPNS1P04632 268 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 ATP5BP06576 529 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 HMBSP08397 361 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 CDK4P11802 303 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 PRKCHP24723 683 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 GRK6P43250 576 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 GRIA4P48058 902 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 COPAP53621 1224 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 BCAT1P54687 386 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 ADAM9Q13443 819 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 TRIP4Q15650 581 aaPredicted RBP8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 FNDC3BQ53EP0 1204 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 RAB41Q5JT25 222 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 C1orf220Q5T0J3 134 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 MPP7Q5T2T1 576 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 PM20D1Q6GTS8 502 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 DBX2Q6ZNG2 339 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 TMPRSS7Q7RTY8 843 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 PIGZQ86VD9 579 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 AHI1Q8N157 1196 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 GUF1Q8N442 669 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 FBXL13Q8NEE6 735 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 RHBDD1Q8TEB9 315 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 SNX19Q92543 992 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 TATDN2Q93075 761 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 IGSF8Q969P0 613 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 ELMO3Q96BJ8 720 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 ERLEC1Q96DZ1 483 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 IPO9Q96P70 1041 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 KCNK17Q96T54 332 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 BTBD1Q9H0C5 482 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 LRRC4Q9HBW1 653 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 SGK2Q9HBY8 427 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 APOBEC3GQ9HC16 384 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 CD93Q9NPY3 652 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 CISHQ9NSE2 258 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 HESX1Q9UBX0 185 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 SUN2Q9UH99 717 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 EIF2B4Q9UI10 523 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 STOML2Q9UJZ1 356 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 KIAA1257Q9ULG3 409 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 TPX2Q9ULW0 747 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 SCML1Q9UN30 329 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 APC2O95996 2303 aa8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 URB1O60287 2271 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-209ENST00000454952 AKAP13Q12802 2813 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 TYW5A2RUC4 315 aaKnown RBP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 KCNJ18B7U540 433 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 XPO1O14980 1071 aaKnown RBP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 IRAK2O43187 625 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 TNFSF14O43557 240 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 PCDHGA12O60330 932 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 RNASEH1O60930 286 aaKnown RBP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 SEMA4FO95754 770 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 DNTTP04053 509 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 TRIM49P0CI25 452 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 TRIM49CP0CI26 452 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 EPB41P11171 864 aaKnown RBP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 PFKFB1P16118 471 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 CD27P26842 260 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 SYKP43405 635 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 MXI1P50539 228 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 CCT8P50990 548 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 TKTL1P51854 596 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 MCCD1P59942 119 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 PPP3CAQ08209 521 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 NUMA1Q14980 2115 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 EDRF1Q3B7T1 1238 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 PROX2Q3B8N5 592 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 FOXD4L6Q3SYB3 417 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 ZNF394Q53GI3 561 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 ADGRF1Q5T601 910 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 FOXD4L5Q5VV16 416 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 FOXD4L3Q6VB84 417 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 PDZD3Q86UT5 571 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 FMNL3Q8IVF7 1028 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 CCDC117Q8IWD4 279 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 UNC45BQ8IWX7 931 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 SIX6OS1Q8N1H7 587 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 PNPLA1Q8N8W4 532 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 RBBP8NLQ8NC74 664 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 C1orf216Q8TAB5 229 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 BAHD1Q8TBE0 780 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 FOXD4L4Q8WXT5 416 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 TMA16Q96EY4 203 aaKnown RBP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 ARID3AQ99856 593 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 DDX50Q9BQ39 737 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms