RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 NETO2Q8NC67 525 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 MYLIPQ8WY64 445 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 RNF34Q969K3 372 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 P2RY11Q96G91 374 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 SERPINB11Q96P15 392 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 SFXN1Q9H9B4 322 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 PIDD1Q9HB75 910 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 OLA1Q9NTK5 396 aaKnown RBP11.39□□□□□ -0.59
SCN9A-205ENST00000454569 LCMT1Q9UIC8 334 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 DNMT3LQ9UJW3 386 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 CDC23Q9UJX2 597 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 AP4E1Q9UPM8 1137 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 NYNRINQ9P2P1 1898 aaKnown RBP11.39□□□□□ -0.59
SCN9A-205ENST00000454569 CHD5Q8TDI0 1954 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 XYLBO75191 536 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 PAGE1O75459 146 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 ZRANB2O95218 330 aaKnown RBP eCLIP11.38□□□□□ -0.59
SCN9A-205ENST00000454569 F9P00740 461 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 KRT7P08729 469 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 MBL2P11226 248 aaPredicted RBP11.38□□□□□ -0.59
SCN9A-205ENST00000454569 HOXB1P14653 301 aaPredicted RBP11.38□□□□□ -0.59
SCN9A-205ENST00000454569 GOT1P17174 413 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 CDC25CP30307 473 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 GBP1P32455 592 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 PPP3CCP48454 512 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 TUBP50607 506 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 SEMA3BQ13214 749 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 CLUL1Q15846 466 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 TAZQ16635 292 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 BOLA3Q53S33 107 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 PPP6R3Q5H9R7 873 aaPredicted RBP11.38□□□□□ -0.59
SCN9A-205ENST00000454569 ZFYVE27Q5T4F4 411 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 EP400NLQ6ZTU2 488 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 GPR149Q86SP6 731 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 KCTD6Q8NC69 237 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 EXD1Q8NHP7 514 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 FAM71BQ8TC56 605 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 TEKT4Q8WW24 435 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 TSC1Q92574 1164 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 MRPS31Q92665 395 aaKnown RBP11.38□□□□□ -0.59
SCN9A-205ENST00000454569 NTAN1Q96AB6 310 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 FAM118BQ9BPY3 351 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 TRIM62Q9BVG3 475 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 SIK2Q9H0K1 926 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 CARD9Q9H257 536 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 ETNK2Q9NVF9 386 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 CLDND1Q9NY35 253 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 CWC15Q9P013 229 aaKnown RBP11.38□□□□□ -0.59
SCN9A-205ENST00000454569 CPQQ9Y646 472 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 HS3ST4Q9Y661 456 aa11.38□□□□□ -0.59
SCN9A-205ENST00000454569 COL6A3P12111 3177 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 hCG_1818297A0A087WSY0 165 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 PRAMEF12O95522 483 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 FGGP02679 453 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 POU2F2P09086 479 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 TCP1P17987 556 aaKnown RBP11.37□□□□□ -0.59
SCN9A-205ENST00000454569 AMPD1P23109 780 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 SLC6A4P31645 630 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 CCR1P32246 355 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 SCAPQ12770 1279 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 PPP2R5DQ14738 602 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 COL19A1Q14993 1142 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 SIX1Q15475 284 aaPredicted RBP11.37□□□□□ -0.59
SCN9A-205ENST00000454569 CCDC85BQ15834 202 aaPredicted RBP11.37□□□□□ -0.59
SCN9A-205ENST00000454569 DPYSL2Q16555 572 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 KAZNQ674X7 775 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 KLHDC10Q6PID8 442 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 CCDC50Q8IVM0 306 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 ZNF683Q8IZ20 524 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 RCOR2Q8IZ40 523 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 PQLC3Q8N755 202 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 TTC16Q8NEE8 873 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 PCDH19Q8TAB3 1148 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 RSPRY1Q96DX4 576 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 PBKQ96KB5 322 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 GUCD1Q96NT3 240 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 LRRC3BQ96PB8 259 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 NACA2Q9H009 215 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 L2HGDHQ9H9P8 463 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.37□□□□□ -0.59
SCN9A-205ENST00000454569 DDX56Q9NY93 547 aaKnown RBP11.37□□□□□ -0.59
SCN9A-205ENST00000454569 SAE1Q9UBE0 346 aaPredicted RBP11.37□□□□□ -0.59
SCN9A-205ENST00000454569 NEU3Q9UQ49 428 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 R3HDM2Q9Y2K5 976 aaKnown RBP11.37□□□□□ -0.59
SCN9A-205ENST00000454569 MIA3Q5JRA6 1907 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 MYO18AQ92614 2054 aaKnown RBP11.37□□□□□ -0.59
SCN9A-205ENST00000454569 TRDMT1O14717 391 aaKnown RBP11.37□□□□□ -0.59
SCN9A-205ENST00000454569 CREB3O43889 395 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 MS4A13Q5J8X5 152 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 BRMS1LQ5PSV4 323 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 NPNTQ6UXI9 565 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 B4GALNT4Q76KP1 1039 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 SND1Q7KZF4 910 aaKnown RBP eCLIP11.37□□□□□ -0.59
SCN9A-205ENST00000454569 SLC13A5Q86YT5 568 aaPredicted RBP11.37□□□□□ -0.59
SCN9A-205ENST00000454569 DENND1CQ8IV53 801 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 TP53INP2Q8IXH6 220 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 CMTM8Q8IZV2 173 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 LRRN4Q8WUT4 740 aa11.37□□□□□ -0.59
SCN9A-205ENST00000454569 USP13Q92995 863 aaPredicted RBP11.37□□□□□ -0.59
SCN9A-205ENST00000454569 PPP2R3CQ969Q6 453 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms