RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 PPP1R15BQ5SWA1 713 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 SYT13Q7L8C5 426 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 KIAA0907Q7Z7F0 614 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-205ENST00000454542 VSTM4Q8IW00 320 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 MCOLN2Q8IZK6 566 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 HJURPQ8NCD3 748 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-205ENST00000454542 KCNV2Q8TDN2 545 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 TBCBQ99426 244 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 DDX50Q9BQ39 737 aaKnown RBP14.7□□□□□ -0.06
HDAC4-205ENST00000454542 FAM126AQ9BYI3 521 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-205ENST00000454542 ARHGEF38Q9NXL2 777 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 TAS2R14Q9NYV8 317 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 CLEC4EQ9ULY5 219 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 MMP17Q9ULZ9 603 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 GOLGA6L7A0A1B0GV03 622 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 PRRT4C9JH25 899 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 I6L893 689 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-205ENST00000454542 M0QYT0 321 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 DDX3XO00571 662 aaKnown RBP eCLIP14.69□□□□□ -0.06
HDAC4-205ENST00000454542 AP5Z1O43299 807 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 LILRB5O75023 590 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 MOCS2O96007 188 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-205ENST00000454542 GZMAP12544 262 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 PTPN9P43378 593 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 KLHL30Q0D2K2 578 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 TRIM14Q14142 442 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 BRMS1LQ5PSV4 323 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 C10orf76Q5T2E6 689 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 ARTNQ5T4W7 220 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 SPECC1LQ69YQ0 1117 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 ACAD10Q6JQN1 1059 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 RFWD3Q6PCD5 774 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 TSSK4Q6SA08 328 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 ANKS1BQ7Z6G8 1248 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 EMC1Q8N766 993 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 ATP6V0D2Q8N8Y2 350 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 IL17RCQ8NAC3 791 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 JOSD2Q8TAC2 188 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 WFDC5Q8TCV5 224 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 BHMTQ93088 406 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 VCPIP1Q96JH7 1222 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 LMLNQ96KR4 655 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 ANLNQ9NQW6 1124 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 SEPT11Q9NVA2 429 aaKnown RBP14.69□□□□□ -0.06
HDAC4-205ENST00000454542 FAM86C1Q9NVL1 165 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 PCDHGA2Q9Y5H1 932 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 USP34Q70CQ2 3546 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 EML5Q05BV3 1969 aa14.69□□□□□ -0.06
HDAC4-205ENST00000454542 VPS13AQ96RL7 3174 aa14.68□□□□□ -0.06
HDAC4-205ENST00000454542 TSPAN3O60637 253 aa14.68□□□□□ -0.06
HDAC4-205ENST00000454542 GJB6O95452 261 aa14.68□□□□□ -0.06
HDAC4-205ENST00000454542 TACR2P21452 398 aa14.68□□□□□ -0.06
HDAC4-205ENST00000454542 HLA-FP30511 346 aa14.68□□□□□ -0.06
HDAC4-205ENST00000454542 CSTF1Q05048 431 aaKnown RBP14.68□□□□□ -0.06
HDAC4-205ENST00000454542 EIF4HQ15056 248 aaKnown RBP14.68□□□□□ -0.06
HDAC4-205ENST00000454542 GEN1Q17RS7 908 aa14.68□□□□□ -0.06
HDAC4-205ENST00000454542 C5orf22Q49AR2 442 aa14.68□□□□□ -0.06
HDAC4-205ENST00000454542 CHSY1Q86X52 802 aa14.68□□□□□ -0.06
HDAC4-205ENST00000454542 ZNF557Q8N988 423 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-205ENST00000454542 DDI1Q8WTU0 396 aa14.68□□□□□ -0.06
HDAC4-205ENST00000454542 CENPIQ92674 756 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-205ENST00000454542 TMA16Q96EY4 203 aaKnown RBP14.68□□□□□ -0.06
HDAC4-205ENST00000454542 CFAP57Q96MR6 1250 aa14.68□□□□□ -0.06
HDAC4-205ENST00000454542 CD248Q9HCU0 757 aa14.68□□□□□ -0.06
HDAC4-205ENST00000454542 ZSCAN32Q9NX65 697 aa14.68□□□□□ -0.06
HDAC4-205ENST00000454542 NENFQ9UMX5 172 aa14.68□□□□□ -0.06
HDAC4-205ENST00000454542 LUC7L2Q9Y383 392 aaKnown RBP14.68□□□□□ -0.06
HDAC4-205ENST00000454542 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.68□□□□□ -0.06
HDAC4-205ENST00000454542 BZW2Q9Y6E2 419 aaKnown RBP14.68□□□□□ -0.06
HDAC4-205ENST00000454542 ATG2BQ96BY7 2078 aa14.68□□□□□ -0.06
HDAC4-205ENST00000454542 CKAP5Q14008 2032 aa14.68□□□□□ -0.06
HDAC4-205ENST00000454542 PLXND1Q9Y4D7 1925 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 CCDC163A0A0D9SF12 145 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 TBC1D3BA6NDS4 549 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 SIGLEC16A6NMB1 481 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 ADAM23O75077 832 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 ADCY5O95622 1261 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 F9P00740 461 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 SERPING1P05155 500 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 SKILP12757 684 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 HNRNPLP14866 589 aaKnown RBP eCLIP14.67□□□□□ -0.06
HDAC4-205ENST00000454542 ABCB4P21439 1286 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 TNFAIP3P21580 790 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 RRM1P23921 792 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 HOXC13P31276 330 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 CASP14P31944 242 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 RDXP35241 583 aaKnown RBP14.67□□□□□ -0.06
HDAC4-205ENST00000454542 ATXN1P54253 815 aaKnown RBP14.67□□□□□ -0.06
HDAC4-205ENST00000454542 SEC13P55735 322 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 RNASE9P60153 205 aaKnown RBP14.67□□□□□ -0.06
HDAC4-205ENST00000454542 RPS24P62847 133 aaKnown RBP14.67□□□□□ -0.06
HDAC4-205ENST00000454542 DEUP1Q05D60 604 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 DMWDQ09019 674 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 NME3Q13232 169 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 ENPP2Q13822 863 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 DMC1Q14565 340 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 CCDC14Q49A88 953 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 TTC39BQ5VTQ0 682 aaPredicted RBP14.67□□□□□ -0.06
HDAC4-205ENST00000454542 EGFLAMQ63HQ2 1017 aa14.67□□□□□ -0.06
HDAC4-205ENST00000454542 RAP1GAP2Q684P5 730 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms