RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SULT1E1P49888 294 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 EPHB3P54753 998 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 RWDD2BP57060 319 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 YWHAGP61981 247 aaKnown RBP eCLIP16.41■□□□□ 0.22
SNX17-204ENST00000453453 ATP11AP98196 1134 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 SLC25A52Q3SY17 297 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 CMPK2Q5EBM0 449 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 ZFYVE27Q5T4F4 411 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 LRRC38Q5VT99 294 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 BTBD8Q5XKL5 378 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 CCDC149Q6ZUS6 474 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 BEND5Q7L4P6 421 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 MON1AQ86VX9 555 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 TDHQ8IZJ6 230 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 C12orf50Q8NA57 414 aaPredicted RBP16.41■□□□□ 0.22
SNX17-204ENST00000453453 GPR152Q8TDT2 470 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 FAM172AQ8WUF8 416 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 SLCO2A1Q92959 643 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 GRAMD1AQ96CP6 724 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 SLITRK1Q96PX8 696 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 ELAC2Q9BQ52 826 aaKnown RBP16.41■□□□□ 0.22
SNX17-204ENST00000453453 SLC28A3Q9HAS3 691 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 ABCC13Q9NSE7 274 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 IL37Q9NZH6 218 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 ARL2BPQ9Y2Y0 163 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 FSCN2O14926 492 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 GRM6O15303 877 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 RIPK2O43353 540 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 PRPSAP2O60256 369 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 LRCH4O75427 683 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 CSPG5O95196 566 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 GLUD1P00367 558 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 VIMP08670 466 aaKnown RBP16.41■□□□□ 0.22
SNX17-204ENST00000453453 CSH1P0DML2 217 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 CSH2P0DML3 217 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 ATF6P18850 670 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 GJC1P36383 396 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 BNIP1Q12981 228 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 C15orf59Q2T9L4 293 aaPredicted RBP16.41■□□□□ 0.22
SNX17-204ENST00000453453 SEL1L2Q5TEA6 688 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 BSPRYQ5W0U4 402 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 TRNP1Q6NT89 227 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 HFE2Q6ZVN8 426 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 STRADAQ7RTN6 431 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 POLNQ7Z5Q5 900 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 CPNE8Q86YQ8 564 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 GIPC2Q8TF65 315 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 NSMCE1Q8WV22 266 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 ART4Q93070 314 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 TLR8Q9NR97 1041 aaKnown RBP16.41■□□□□ 0.22
SNX17-204ENST00000453453 DDX56Q9NY93 547 aaKnown RBP16.41■□□□□ 0.22
SNX17-204ENST00000453453 INSL5Q9Y5Q6 135 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 TGM5O43548 720 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 TCEA3O75764 348 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 RARAP10276 462 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 DNAJB1P25685 340 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 CETN2P41208 172 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 PLTPP55058 493 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 TAS2R40P59535 323 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 COPS2P61201 443 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 AUHQ13825 339 aaKnown RBP16.4■□□□□ 0.22
SNX17-204ENST00000453453 SLC29A2Q14542 456 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 NAA25Q14CX7 972 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 DAB2IPQ5VWQ8 1189 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 SYDE1Q6ZW31 735 aaPredicted RBP16.4■□□□□ 0.22
SNX17-204ENST00000453453 BHLHA9Q7RTU4 235 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 ITIH5Q86UX2 942 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 PDZD8Q8NEN9 1154 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 FBXO25Q8TCJ0 367 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 RNF139Q8WU17 664 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 KRT35Q92764 455 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 LMAN2LQ9H0V9 348 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 ARHGEF3Q9NR81 526 aa16.4■□□□□ 0.22
SNX17-204ENST00000453453 MAGED2Q9UNF1 606 aaPredicted RBP16.4■□□□□ 0.22
SNX17-204ENST00000453453 MTCL1Q9Y4B5 1905 aaKnown RBP16.39■□□□□ 0.21
SNX17-204ENST00000453453 FAM92AA1XBS5 289 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 HIDE1A8MVS5 230 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 ATP5HO75947 161 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 ANP32DO95626 131 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 C1RP00736 705 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 RALAP11233 206 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 MIPP30301 263 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 MARCKSL1P49006 195 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 PEX5P50542 639 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 USP46P62068 366 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 TWF1Q12792 350 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 RNF43Q68DV7 783 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 SCYL2Q6P3W7 929 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 ELMSAN1Q6PJG2 1045 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 SPRED2Q7Z698 418 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 KATNAL2Q8IYT4 538 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 STKLD1Q8NE28 680 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 SLC7A14Q8TBB6 771 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 OVCA2Q8WZ82 227 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 EDEM1Q92611 657 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 CENPIQ92674 756 aaPredicted RBP16.39■□□□□ 0.21
SNX17-204ENST00000453453 STAMBPL1Q96FJ0 436 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 RAB3IPQ96QF0 476 aaPredicted RBP16.39■□□□□ 0.21
SNX17-204ENST00000453453 TBCBQ99426 244 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 NPY6RQ99463 290 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms