RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 NUP58Q9BVL2 599 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 SLC2A11Q9BYW1 496 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 UBXN6Q9BZV1 441 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 LHX5Q9H2C1 402 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 GDPD2Q9HCC8 539 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 TM7SF3Q9NS93 570 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 ABCB8Q9NUT2 735 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 HESX1Q9UBX0 185 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 PCOLCE2Q9UKZ9 415 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 HBS1LQ9Y450 684 aaKnown RBP12.19□□□□□ -0.46
GARNL3-210ENST00000453030 NFE2L3Q9Y4A8 694 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 A0A1B0GVT2 93 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 A0A1W2PQ27 194 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 A0A1W2PQ64 194 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 YJEFN3A6XGL0 299 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 E7ENQ6 273 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 PIK3R2O00459 728 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 ZNF202O95125 648 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 LCP1P13796 627 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 ACSL1P33121 698 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 BNC1Q01954 994 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 SCAPQ12770 1279 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 COL9A2Q14055 689 aaPredicted RBP12.18□□□□□ -0.46
GARNL3-210ENST00000453030 BSPRYQ5W0U4 402 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 PROSER1Q86XN7 944 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 WFIKKN2Q8TEU8 576 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 ADAMTS14Q8WXS8 1223 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 C6orf106Q9H6K1 298 aaPredicted RBP12.18□□□□□ -0.46
GARNL3-210ENST00000453030 GGA2Q9UJY4 613 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 APOBEC2Q9Y235 224 aaKnown RBP12.18□□□□□ -0.46
GARNL3-210ENST00000453030 IGSF10Q6WRI0 2623 aa12.18□□□□□ -0.46
GARNL3-210ENST00000453030 FAM221BA6H8Z2 402 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 GOLGA8CPA6NN73 597 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 TAF4O00268 1085 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 O00370 1275 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 SLC16A3O15427 465 aaKnown RBP12.17□□□□□ -0.46
GARNL3-210ENST00000453030 CBFA2T3O75081 653 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 SETSIPP0DME0 302 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 PABPC1P11940 636 aaKnown RBP12.17□□□□□ -0.46
GARNL3-210ENST00000453030 PRCPP42785 496 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 CSNK1EP49674 416 aaKnown RBP12.17□□□□□ -0.46
GARNL3-210ENST00000453030 RGS7P49802 495 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 AFF3P51826 1226 aaKnown RBP12.17□□□□□ -0.46
GARNL3-210ENST00000453030 YWHAEP62258 255 aaKnown RBP12.17□□□□□ -0.46
GARNL3-210ENST00000453030 CAMK2GQ13555 558 aaPredicted RBP12.17□□□□□ -0.46
GARNL3-210ENST00000453030 HLA-BQ31612 363 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 RFWD3Q6PCD5 774 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 IL27RAQ6UWB1 636 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 SLCO6A1Q86UG4 719 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 ZC3H3Q8IXZ2 948 aaKnown RBP12.17□□□□□ -0.46
GARNL3-210ENST00000453030 AHI1Q8N157 1196 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 WFDC5Q8TCV5 224 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 TMA16Q96EY4 203 aaKnown RBP12.17□□□□□ -0.46
GARNL3-210ENST00000453030 TSG101Q99816 390 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 SCAND2PQ9GZW5 306 aaPredicted RBP12.17□□□□□ -0.46
GARNL3-210ENST00000453030 TMEM245Q9H330 911 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 PLA2G4CQ9UP65 541 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 DOCK9Q9BZ29 2069 aa12.17□□□□□ -0.46
GARNL3-210ENST00000453030 TRIM49BA6NDI0 452 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 M0QYV0 167 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 TIMM44O43615 452 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 TBL1XO60907 577 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 SEMA4FO95754 770 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 DNTTP04053 509 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 ZNF883P0CG24 379 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 VDRP11473 427 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 CD70P32970 193 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 PMS1P54277 932 aaKnown RBP12.16□□□□□ -0.46
GARNL3-210ENST00000453030 DAOAP59103 153 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 ZNF445P59923 1031 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 PTPRNQ16849 979 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 ADGRF1Q5T601 910 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 MBLAC2Q68D91 279 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 TMEM270Q6UE05 265 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 ADIPOR2Q86V24 386 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 C1orf216Q8TAB5 229 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 ERCC4Q92889 916 aaPredicted RBP12.16□□□□□ -0.46
GARNL3-210ENST00000453030 CCDC34Q96HJ3 373 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 TM9SF3Q9HD45 589 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 CNGB3Q9NQW8 809 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 ABCC13Q9NSE7 274 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 RMND1Q9NWS8 449 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 STIM2Q9P246 746 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 BTBD3Q9Y2F9 522 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.16□□□□□ -0.46
GARNL3-210ENST00000453030 SNX11Q9Y5W9 270 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 BPTFQ12830 3046 aa12.16□□□□□ -0.46
GARNL3-210ENST00000453030 URB1O60287 2271 aaKnown RBP12.16□□□□□ -0.46
GARNL3-210ENST00000453030 GOLGA6L7A0A1B0GV03 622 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 FLRT2O43155 660 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 FSBPO95073 299 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 LATS1O95835 1130 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 CALCAP01258 141 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 CAPNS1P04632 268 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 DLDP09622 509 aaKnown RBP12.15□□□□□ -0.46
GARNL3-210ENST00000453030 POLR2EP19388 210 aaKnown RBP12.15□□□□□ -0.46
GARNL3-210ENST00000453030 TBXAS1P24557 533 aaPredicted RBP12.15□□□□□ -0.46
GARNL3-210ENST00000453030 MCCD1P59942 119 aaPredicted RBP12.15□□□□□ -0.46
GARNL3-210ENST00000453030 RPS14P62263 151 aaKnown RBP12.15□□□□□ -0.46
GARNL3-210ENST00000453030 IL9RQ01113 521 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms