RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 POLNQ7Z5Q5 900 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 DAAM2Q86T65 1068 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 SYCE1Q8N0S2 351 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 CCAR2Q8N163 923 aaKnown RBP12□□□□□ -0.49
SCN9A-204ENST00000452182 CPXM2Q8N436 756 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 KIAA1524Q8TCG1 905 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 DDX50Q9BQ39 737 aaKnown RBP12□□□□□ -0.49
SCN9A-204ENST00000452182 KXD1Q9BQD3 176 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 FAM83CQ9BQN1 747 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 RPP25Q9BUL9 199 aaKnown RBP12□□□□□ -0.49
SCN9A-204ENST00000452182 PLA2G2FQ9BZM2 168 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 OSBPL2Q9H1P3 480 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 ANLNQ9NQW6 1124 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 LIMD1Q9UGP4 676 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 GRID2IPA4D2P6 1211 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 CHADO15335 359 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 PAGE1O75459 146 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 MOCS3O95396 460 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 COMTP21964 271 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 MLLT6P55198 1093 aaPredicted RBP12□□□□□ -0.49
SCN9A-204ENST00000452182 NRG1Q02297 640 aaPredicted RBP12□□□□□ -0.49
SCN9A-204ENST00000452182 PDGFRLQ15198 375 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 ERMARDQ5T6L9 678 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 LRRC38Q5VT99 294 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 SCYL2Q6P3W7 929 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 BBS7Q8IWZ6 715 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 CCDC185Q8N715 623 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 TEKT4Q8WW24 435 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 PEBP4Q96S96 227 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 TRMT61BQ9BVS5 477 aaKnown RBP12□□□□□ -0.49
SCN9A-204ENST00000452182 FZD10Q9ULW2 581 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 CAPN6Q9Y6Q1 641 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 GFRA2O00451 464 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 MOCS2O96007 188 aaPredicted RBP11.99□□□□□ -0.49
SCN9A-204ENST00000452182 KRT7P08729 469 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 TCF4P15884 667 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 IL1R2P27930 398 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 IFNAR2P48551 515 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 EML3Q32P44 896 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 FAM133BQ5BKY9 247 aaKnown RBP11.99□□□□□ -0.49
SCN9A-204ENST00000452182 MS4A13Q5J8X5 152 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 EFHC2Q5JST6 749 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 PIK3R6Q5UE93 754 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 DAB2IPQ5VWQ8 1189 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 NADSYN1Q6IA69 706 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 TMEM92Q6UXU6 159 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 YAF2Q8IY57 180 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 ADGRG2Q8IZP9 1017 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 SLC44A3Q8N4M1 653 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 TRIM58Q8NG06 486 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 ALS2CR12Q96Q35 445 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 PRMT1Q99873 361 aaKnown RBP11.99□□□□□ -0.49
SCN9A-204ENST00000452182 TRPV5Q9NQA5 729 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 DUS2Q9NX74 493 aaKnown RBP11.99□□□□□ -0.49
SCN9A-204ENST00000452182 PCSK1NQ9UHG2 260 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 XPO7Q9UIA9 1087 aaKnown RBP11.99□□□□□ -0.49
SCN9A-204ENST00000452182 HS3ST4Q9Y661 456 aa11.99□□□□□ -0.49
SCN9A-204ENST00000452182 TMEM110-MUSTN1A8MSY1 372 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 ARNTLO00327 626 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 PSTPIP1O43586 416 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 SPOPO43791 374 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 PALMO75781 387 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 ZNF135P52742 658 aaPredicted RBP11.98□□□□□ -0.49
SCN9A-204ENST00000452182 TAS2R40P59535 323 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 DPYSL2Q16555 572 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 C5orf22Q49AR2 442 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 CPNE8Q86YQ8 564 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 RHOT1Q8IXI2 618 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 TTC16Q8NEE8 873 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 RSAD2Q8WXG1 361 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 IRF7Q92985 503 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 CD101Q93033 1021 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 ATP2A3Q93084 1043 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 ASIC4Q96FT7 647 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 SNRNP25Q9BV90 132 aaKnown RBP11.98□□□□□ -0.49
SCN9A-204ENST00000452182 LINC00597Q9H2U6 94 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 GOLPH3Q9H4A6 298 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 TRMT1Q9NXH9 659 aaKnown RBP11.98□□□□□ -0.49
SCN9A-204ENST00000452182 ZKSCAN5Q9Y2L8 839 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 WNT6Q9Y6F9 365 aa11.98□□□□□ -0.49
SCN9A-204ENST00000452182 USP27XA6NNY8 438 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 NFATC1O95644 943 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 RARAP10276 462 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 TACR2P21452 398 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 GDI1P31150 447 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 SLC6A4P31645 630 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 L1CAMP32004 1257 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 HTR7P34969 479 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 SEMA3BQ13214 749 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 TDGQ13569 410 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 AUHQ13825 339 aaKnown RBP11.97□□□□□ -0.49
SCN9A-204ENST00000452182 GRM2Q14416 872 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 TJAP1Q5JTD0 557 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 MPP7Q5T2T1 576 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 MANEALQ5VSG8 457 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 NT5DC3Q86UY8 548 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.97□□□□□ -0.49
SCN9A-204ENST00000452182 ZNF683Q8IZ20 524 aa11.97□□□□□ -0.49
SCN9A-204ENST00000452182 ST13P5Q8NFI4 369 aaPredicted RBP11.97□□□□□ -0.49
SCN9A-204ENST00000452182 FAM71BQ8TC56 605 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms