RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 PLAAQ9Y263 795 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 MFHAS1Q9Y4C4 1052 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 FARP1Q9Y4F1 1045 aaPredicted RBP14.73□□□□□ -0.05
USP39-207ENST00000450066 RAD54BQ9Y620 910 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 ZNF638Q14966 1978 aaKnown RBP14.72□□□□□ -0.05
USP39-207ENST00000450066 ALPK3Q96L96 1907 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.72□□□□□ -0.05
USP39-207ENST00000450066 MFSD11O43934 449 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 OPA1O60313 960 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 PAGE1O75459 146 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 FGF18O76093 207 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 LRIG2O94898 1065 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 ACTN2P35609 894 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 CHKAP35790 457 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 CREMQ03060 361 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 CEP128Q6ZU80 1094 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 TRMT10CQ7L0Y3 403 aaKnown RBP14.72□□□□□ -0.05
USP39-207ENST00000450066 CCDC25Q86WR0 208 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 PPIL6Q8IXY8 311 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 ZBTB9Q96C00 473 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 SLC39A13Q96H72 371 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 FNIP2Q9P278 1114 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 MAFFQ9ULX9 164 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 H0YGN5 161 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 SMAPO00193 183 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 EPHB2P29323 1055 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 OAS2P29728 719 aaKnown RBP14.72□□□□□ -0.05
USP39-207ENST00000450066 PDK1Q15118 436 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 C4orf22Q6V702 233 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 HOOK3Q86VS8 718 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 RELL1Q8IUW5 271 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 C7orf61Q8IZ16 206 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 ZNF276Q8N554 614 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 PDZD8Q8NEN9 1154 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 TFB1MQ8WVM0 346 aaKnown RBP14.72□□□□□ -0.05
USP39-207ENST00000450066 OVCA2Q8WZ82 227 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 EPB41L4BQ9H329 900 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 SEMA4AQ9H3S1 761 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 CYP4F11Q9HBI6 524 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 PAK5Q9P286 719 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 MAGED2Q9UNF1 606 aaPredicted RBP14.72□□□□□ -0.05
USP39-207ENST00000450066 SNX10Q9Y5X0 201 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 NFS1Q9Y697 457 aa14.72□□□□□ -0.05
USP39-207ENST00000450066 KIAA1671Q9BY89 1806 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 LILRB3O75022 631 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 ALDH1A3P47895 512 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 NRLP54845 237 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 TBX4P57082 545 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 NRG1Q02297 640 aaPredicted RBP14.71□□□□□ -0.05
USP39-207ENST00000450066 EFEMP1Q12805 493 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 C10orf120Q5SQS8 335 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 SNX30Q5VWJ9 437 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 GOLGA6L1Q8N7Z2 621 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 PHOSPHO2Q8TCD6 241 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 AUTS2Q8WXX7 1259 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 HERVK_113Q902F9 699 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 CPT1BQ92523 772 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 PRCCQ92733 491 aaPredicted RBP14.71□□□□□ -0.05
USP39-207ENST00000450066 FCRL2Q96LA5 508 aaPredicted RBP14.71□□□□□ -0.05
USP39-207ENST00000450066 C1orf74Q96LT6 269 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 CDK5RAP1Q96SZ6 601 aaKnown RBP14.71□□□□□ -0.05
USP39-207ENST00000450066 RAD9AQ99638 391 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 RXFP1Q9HBX9 757 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 MARCH2Q9P0N8 246 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 SSX2IPQ9Y2D8 614 aa14.71□□□□□ -0.05
USP39-207ENST00000450066 PPP1R12AO14974 1030 aaPredicted RBP14.7□□□□□ -0.06
USP39-207ENST00000450066 NCAM2O15394 837 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 GCATO75600 419 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 ZNF189O75820 626 aaPredicted RBP14.7□□□□□ -0.06
USP39-207ENST00000450066 TBX18O95935 607 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 NUDT17P0C025 328 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 CSH1P0DML2 217 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 CSH2P0DML3 217 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 DNAJB2P25686 324 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 PRKD1Q15139 912 aaPredicted RBP14.7□□□□□ -0.06
USP39-207ENST00000450066 TRIP4Q15650 581 aaPredicted RBP14.7□□□□□ -0.06
USP39-207ENST00000450066 MANEALQ5VSG8 457 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 DENND2CQ68D51 928 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 HEATR6Q6AI08 1181 aaKnown RBP14.7□□□□□ -0.06
USP39-207ENST00000450066 HERC6Q8IVU3 1022 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 TCEAL8Q8IYN2 117 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 NAT8LQ8N9F0 302 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 SP7Q8TDD2 431 aaPredicted RBP14.7□□□□□ -0.06
USP39-207ENST00000450066 MYRFLQ96LU7 910 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 SIK2Q9H0K1 926 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 ZBP1Q9H171 429 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 YIPF1Q9Y548 306 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 SLC4A7Q9Y6M7 1214 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 C5orf60A6NFR6 353 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 FGF10O15520 208 aaPredicted RBP14.7□□□□□ -0.06
USP39-207ENST00000450066 TLR5O60602 858 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 CTSAP10619 480 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 HMGA1P17096 107 aaKnown RBP14.7□□□□□ -0.06
USP39-207ENST00000450066 HOXC13P31276 330 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 SERPINB6P35237 376 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 MLLT6P55198 1093 aaPredicted RBP14.7□□□□□ -0.06
USP39-207ENST00000450066 EIF3BP55884 814 aaKnown RBP14.7□□□□□ -0.06
USP39-207ENST00000450066 CBX1P83916 185 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 TADA2BQ86TJ2 420 aa14.7□□□□□ -0.06
USP39-207ENST00000450066 HTR3CQ8WXA8 447 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms