RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 TUBD1Q9UJT1 453 aa8.34□□□□□ -1.07
LINC01961-201ENST00000449954 GTF3C4Q9UKN8 822 aa8.34□□□□□ -1.07
LINC01961-201ENST00000449954 SLC27A6Q9Y2P4 619 aa8.34□□□□□ -1.07
LINC01961-201ENST00000449954 C2CD2Q9Y426 696 aa8.34□□□□□ -1.07
LINC01961-201ENST00000449954 TMEM229AB2RXF0 380 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 OGTO15294 1046 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 SLC16A4O15374 487 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 COCHO43405 550 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 HUS1O60921 280 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 PLXNA2O75051 1894 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 AGFG2O95081 481 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 IGHV4-34P06331 123 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 ITGA2BP08514 1039 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 ACO1P21399 889 aaKnown RBP8.33□□□□□ -1.08
LINC01961-201ENST00000449954 TRAPPC10P48553 1259 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 CD97P48960 835 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 TUBP50607 506 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 NXPH1P58417 271 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 MORC3Q14149 939 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 EIF4HQ15056 248 aaKnown RBP8.33□□□□□ -1.08
LINC01961-201ENST00000449954 MAPRE1Q15691 268 aaKnown RBP8.33□□□□□ -1.08
LINC01961-201ENST00000449954 TBR1Q16650 682 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 ISXQ2M1V0 245 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 EFHC2Q5JST6 749 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 TDRD10Q5VZ19 366 aaKnown RBP8.33□□□□□ -1.08
LINC01961-201ENST00000449954 KIAA0895LQ68EN5 471 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 Q6ZUG5 572 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 PTRH1Q86Y79 214 aaKnown RBP8.33□□□□□ -1.08
LINC01961-201ENST00000449954 DAW1Q8N136 415 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 PDCL2Q8N4E4 241 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 SSC4DQ8WTU2 575 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 OVCA2Q8WZ82 227 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 PCNX1Q96RV3 2341 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 NTPCRQ9BSD7 190 aaKnown RBP8.33□□□□□ -1.08
LINC01961-201ENST00000449954 HAPLN2Q9GZV7 340 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 ASB7Q9H672 318 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 NCOA5Q9HCD5 579 aaKnown RBP8.33□□□□□ -1.08
LINC01961-201ENST00000449954 POLD4Q9HCU8 107 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 AASDHPPTQ9NRN7 309 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 TPX2Q9ULW0 747 aaKnown RBP8.33□□□□□ -1.08
LINC01961-201ENST00000449954 KCNJ14Q9UNX9 436 aa8.33□□□□□ -1.08
LINC01961-201ENST00000449954 PDZD2O15018 2839 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 MYH10P35580 1976 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 A6NJY4 79 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 CPLX1O14810 134 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 SIGLEC6O43699 453 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 FAM189A1O60320 539 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 HIP1RO75146 1068 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 DNTTP04053 509 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 WNT1P04628 370 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 EPHX1P07099 455 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 THBS1P07996 1170 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 CISD3P0C7P0 127 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 CKMT1AP12532 417 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 ACAT1P24752 427 aaKnown RBP8.32□□□□□ -1.08
LINC01961-201ENST00000449954 LHX1P48742 406 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 TAF10Q12962 218 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 BNIP3Q12983 259 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 CAMK2GQ13555 558 aaPredicted RBP8.32□□□□□ -1.08
LINC01961-201ENST00000449954 ZNF234Q14588 700 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 CPLX2Q6PUV4 134 aaKnown RBP8.32□□□□□ -1.08
LINC01961-201ENST00000449954 SERPINA13PQ6UXR4 307 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 HTR3DQ70Z44 454 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 OR4C6Q8NH72 309 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 MIB2Q96AX9 1013 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 MOCOSQ96EN8 888 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 BICD1Q96G01 975 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 TIPINQ9BVW5 301 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 AGXT2Q9BYV1 514 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 ABCG4Q9H172 646 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 USP29Q9HBJ7 922 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 ENAMQ9NRM1 1142 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 MAGEC2Q9UBF1 373 aaPredicted RBP8.32□□□□□ -1.08
LINC01961-201ENST00000449954 FBXO10Q9UK96 956 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 L1RE1Q9UN81 338 aa8.32□□□□□ -1.08
LINC01961-201ENST00000449954 ABCA2Q9BZC7 2435 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 LRRK1Q38SD2 2015 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 A0A1B0GVM2 712 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 A0A1W2PR77 199 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 VPS37CA5D8V6 355 aaPredicted RBP8.31□□□□□ -1.08
LINC01961-201ENST00000449954 H0YCG3 227 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 TLR4O00206 839 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 CDK2AP1O14519 115 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 MAGEC1O60732 1142 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 MAPTP10636 758 aaKnown RBP8.31□□□□□ -1.08
LINC01961-201ENST00000449954 PRKCHP24723 683 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 PDIA3P30101 505 aaKnown RBP8.31□□□□□ -1.08
LINC01961-201ENST00000449954 CDC25AP30304 524 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 DCTP40126 519 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 LIG4P49917 911 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 CCT2P78371 535 aaKnown RBP8.31□□□□□ -1.08
LINC01961-201ENST00000449954 GOLGA8FQ08AF8 430 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 GOLGA8DPQ0D2H9 430 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 KCNMA1Q12791 1236 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 HECTD3Q5T447 861 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 FHL5Q5TD97 284 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 FAM171BQ6P995 826 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 TPGS1Q6ZTW0 290 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 ANKS1BQ7Z6G8 1248 aa8.31□□□□□ -1.08
LINC01961-201ENST00000449954 TMEM161BQ8NDZ6 487 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms