RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 PRICKLE1Q96MT3 831 aaPredicted RBP12.39□□□□□ -0.43
LSP1P3-201ENST00000449530 ACOX2Q99424 681 aa12.39□□□□□ -0.43
LSP1P3-201ENST00000449530 TPSD1Q9BZJ3 242 aa12.39□□□□□ -0.43
LSP1P3-201ENST00000449530 NUCKS1Q9H1E3 243 aaKnown RBP12.39□□□□□ -0.43
LSP1P3-201ENST00000449530 NCDNQ9UBB6 729 aa12.39□□□□□ -0.43
LSP1P3-201ENST00000449530 XPO7Q9UIA9 1087 aaKnown RBP12.39□□□□□ -0.43
LSP1P3-201ENST00000449530 FBXO10Q9UK96 956 aa12.39□□□□□ -0.43
LSP1P3-201ENST00000449530 RAB23Q9ULC3 237 aa12.39□□□□□ -0.43
LSP1P3-201ENST00000449530 SLC27A6Q9Y2P4 619 aa12.39□□□□□ -0.43
LSP1P3-201ENST00000449530 ZFHX4Q86UP3 3567 aa12.39□□□□□ -0.43
LSP1P3-201ENST00000449530 FRYLO94915 3013 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 OTOGLQ3ZCN5 2332 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 EP300Q09472 2414 aaPredicted RBP12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 NCOR2Q9Y618 2525 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 A0A1B0GTH6 734 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 TCRBV21S2A2A0A5A6 115 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 TYW5A2RUC4 315 aaKnown RBP12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 TBL1XO60907 577 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 RPP40O75818 363 aaKnown RBP12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 SERPINC1P01008 464 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 DGKEP52429 567 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 RNASE9P60153 205 aaKnown RBP12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 NME3Q13232 169 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 SKOR2Q2VWA4 1001 aaPredicted RBP12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 PIK3R6Q5UE93 754 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 OTUD1Q5VV17 481 aaPredicted RBP12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 RAP1GAP2Q684P5 730 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 MMS22LQ6ZRQ5 1243 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 CHSY1Q86X52 802 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 KIAA2013Q8IYS2 634 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 ZNF397Q8NF99 534 aaPredicted RBP12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 MDGA1Q8NFP4 955 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 KCNV2Q8TDN2 545 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 HMGB4Q8WW32 186 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 GAB3Q8WWW8 586 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 RNF34Q969K3 372 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 AZIN2Q96A70 460 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 TMA16Q96EY4 203 aaKnown RBP12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 MYEOVQ96EZ4 313 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 DDX50Q9BQ39 737 aaKnown RBP12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 C11orf70Q9BRQ4 267 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 SLC2A11Q9BYW1 496 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 CIPCQ9C0C6 399 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 POLMQ9NP87 494 aaPredicted RBP12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 SEPT11Q9NVA2 429 aaKnown RBP12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 CACNA2D2Q9NY47 1150 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 STIM2Q9P246 746 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 BCCIPQ9P287 314 aaKnown RBP eCLIP12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 STARD13Q9Y3M8 1113 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 GPR179Q6PRD1 2367 aa12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 NYNRINQ9P2P1 1898 aaKnown RBP12.38□□□□□ -0.43
LSP1P3-201ENST00000449530 PLXND1Q9Y4D7 1925 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 KMT2BQ9UMN6 2715 aaPredicted RBP12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 CCDC163A0A0D9SF12 145 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 GOLGA6L19H0YKK7 550 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 M0QYT0 321 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 ALDH1A2O94788 518 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 CYP1A1P04798 512 aaPredicted RBP12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 TACR2P21452 398 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 NTSR1P30989 418 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 GBP1P32455 592 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 CNR2P34972 360 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 NOS2P35228 1153 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 SCNN1AP37088 669 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 MATKP42679 507 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 GABRB2P47870 512 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 SULT1E1P49888 294 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 RPS24P62847 133 aaKnown RBP12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 TRIM72Q6ZMU5 477 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 RASSF3Q86WH2 238 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 MFN1Q8IWA4 741 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 LGI2Q8N0V4 545 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 DCLK2Q8N568 766 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 ATP6V0D2Q8N8Y2 350 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 SLC30A5Q8TAD4 765 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 WFDC5Q8TCV5 224 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 RUBCNQ92622 972 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 BTN2A3PQ96KV6 586 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 NAP1L5Q96NT1 182 aaPredicted RBP12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 PCDHB18PQ96TA0 734 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 METTL5Q9NRN9 209 aaKnown RBP12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 ABCB8Q9NUT2 735 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 EBF1Q9UH73 591 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 GMEB2Q9UKD1 530 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 STAP1Q9ULZ2 295 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 RAD54BQ9Y620 910 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 TPRP12270 2363 aaKnown RBP12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 CKAP5Q14008 2032 aa12.37□□□□□ -0.43
LSP1P3-201ENST00000449530 F5H5T6 163 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 SLC2A3P11169 496 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 FERP16591 822 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 TFE3P19532 575 aaPredicted RBP12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 ABCB4P21439 1286 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 HLA-FP30511 346 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 CCR1P32246 355 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 FLT3P36888 993 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 NSFP46459 744 aaKnown RBP12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 FANCCQ00597 558 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms