RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 AIF1P55008 147 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 RAB41Q5JT25 222 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 GNASQ5JWF2 1037 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 ASRGL1Q7L266 308 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 TBC1D1Q86TI0 1168 aaPredicted RBP16.79■□□□□ 0.28
OTUB1-204ENST00000447683 ZMIZ2Q8NF64 920 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 NTAN1Q96AB6 310 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 PIGVQ9NUD9 493 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 GIT1Q9Y2X7 761 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 NR2E3Q9Y5X4 410 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 DCLK1O15075 740 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 OPHN1O60890 802 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 CTGFP29279 349 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 CCNFP41002 786 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 CLCNKBP51801 687 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 PDK1Q15118 436 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 STEAP4Q687X5 459 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 DENND5BQ6ZUT9 1274 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 RNF169Q8NCN4 708 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 C3orf58Q8NDZ4 430 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 THOC1Q96FV9 657 aaKnown RBP16.78■□□□□ 0.28
OTUB1-204ENST00000447683 PCED1BQ96HM7 432 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 MYLK2Q9H1R3 596 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 CNGB3Q9NQW8 809 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 ARHGEF3Q9NR81 526 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 MKS1Q9NXB0 559 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 MOCS1Q9NZB8 636 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 CDH9Q9ULB4 789 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 PTCH2Q9Y6C5 1203 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 MAD1L1Q9Y6D9 718 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 MYBPHLA2RUH7 354 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 WDR91A4D1P6 747 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 AP1G2O75843 785 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 DCTN3O75935 186 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 CSH1P0DML2 217 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 CSH2P0DML3 217 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 CYBAP13498 195 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 ALDH3A1P30838 453 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 ADRA1BP35368 520 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 MGAT3Q09327 533 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 SCAPQ12770 1279 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 NME3Q13232 169 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 TRMT10BQ6PF06 316 aaKnown RBP16.78■□□□□ 0.28
OTUB1-204ENST00000447683 CXCL17Q6UXB2 119 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 AGMOQ6ZNB7 445 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 RFX8Q6ZV50 586 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 MRPL10Q7Z7H8 261 aaKnown RBP16.78■□□□□ 0.28
OTUB1-204ENST00000447683 SERINC5Q86VE9 423 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 MAB21L3Q8N8X9 362 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 COLGALT1Q8NBJ5 622 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 PTPRN2Q92932 1015 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 LPPQ93052 612 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 KLHL29Q96CT2 875 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 MTBPQ96DY7 904 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 PGAP3Q96FM1 320 aaPredicted RBP16.78■□□□□ 0.28
OTUB1-204ENST00000447683 P2RY11Q96G91 374 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 UPF3AQ9H1J1 476 aaKnown RBP16.78■□□□□ 0.28
OTUB1-204ENST00000447683 ZFYVE28Q9HCC9 887 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 WDR6Q9NNW5 1121 aaKnown RBP16.78■□□□□ 0.28
OTUB1-204ENST00000447683 TMEM30AQ9NV96 361 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 RPS6KL1Q9Y6S9 549 aa16.78■□□□□ 0.28
OTUB1-204ENST00000447683 SYNJ2BP-COX16A0A087WUM0 186 aa16.77■□□□□ 0.28
OTUB1-204ENST00000447683 ARL5CA6NH57 179 aa16.77■□□□□ 0.28
OTUB1-204ENST00000447683 YJEFN3A6XGL0 299 aa16.77■□□□□ 0.28
OTUB1-204ENST00000447683 E7ENQ6 273 aa16.77■□□□□ 0.28
OTUB1-204ENST00000447683 RNF103O00237 685 aa16.77■□□□□ 0.28
OTUB1-204ENST00000447683 C2CD2LO14523 706 aa16.77■□□□□ 0.28
OTUB1-204ENST00000447683 STK10O94804 968 aaKnown RBP16.77■□□□□ 0.28
OTUB1-204ENST00000447683 UNC5CO95185 931 aa16.77■□□□□ 0.28
OTUB1-204ENST00000447683 RPL9P32969 192 aaKnown RBP16.77■□□□□ 0.28
OTUB1-204ENST00000447683 KCNJ2P63252 427 aa16.77■□□□□ 0.28
OTUB1-204ENST00000447683 SEMA3BQ13214 749 aa16.77■□□□□ 0.28
OTUB1-204ENST00000447683 RIPK1Q13546 671 aa16.77■□□□□ 0.28
OTUB1-204ENST00000447683 SNCBQ16143 134 aa16.77■□□□□ 0.28
OTUB1-204ENST00000447683 LRRC8BQ6P9F7 803 aa16.77■□□□□ 0.28
OTUB1-204ENST00000447683 OXNAD1Q96HP4 312 aaPredicted RBP16.77■□□□□ 0.28
OTUB1-204ENST00000447683 FAM111AQ96PZ2 611 aa16.77■□□□□ 0.28
OTUB1-204ENST00000447683 LRRC37BQ96QE4 947 aa16.77■□□□□ 0.28
OTUB1-204ENST00000447683 TRIM56Q9BRZ2 755 aaKnown RBP16.77■□□□□ 0.28
OTUB1-204ENST00000447683 COX16Q9P0S2 106 aa16.77■□□□□ 0.28
OTUB1-204ENST00000447683 COL4A4P53420 1690 aaPredicted RBP16.77■□□□□ 0.27
OTUB1-204ENST00000447683 HHLA1C9JL84 531 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 EEF2KO00418 725 aaKnown RBP16.76■□□□□ 0.27
OTUB1-204ENST00000447683 CREB3O43889 395 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 UGT1A9O60656 530 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 RFPL1O75677 317 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 ALDH1A2O94788 518 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 IL1BP01584 269 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 RPS6KA3P51812 740 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 NKX3-2P78367 333 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 SPDYAQ5MJ70 313 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 FYB2Q5VWT5 728 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 DSTYKQ6XUX3 929 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 GPRIN1Q7Z2K8 1008 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 SRPK1Q96SB4 655 aaKnown RBP16.76■□□□□ 0.27
OTUB1-204ENST00000447683 FERMT1Q9BQL6 677 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 PRDM12Q9H4Q4 367 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 UGT1A7Q9HAW7 530 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 UGT1A10Q9HAW8 530 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 UGT1A8Q9HAW9 530 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms