RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 UBE3CQ15386 1083 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 SMTNL2Q2TAL5 461 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 EIF2S3LQ2VIR3 472 aaKnown RBP5.48□□□□□ -1.53
SDCBP-205ENST00000447267 DCAF6Q58WW2 860 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 IQCEQ6IPM2 695 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 GIMAP6Q6P9H5 292 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 IL27RAQ6UWB1 636 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 CATIPQ7Z7H3 387 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 CPNE8Q86YQ8 564 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 IFNL3Q8IZI9 196 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 LSMEM2Q8N112 164 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 ENGASEQ8NFI3 743 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 MAP7D2Q96T17 732 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 SYT3Q9BQG1 590 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 GPR88Q9GZN0 384 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 BOLA2Q9H3K6 86 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 ASAH2Q9NR71 780 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 THSD1Q9NS62 852 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 PAG1Q9NWQ8 432 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 CALCOCO1Q9P1Z2 691 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 GULP1Q9UBP9 304 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 SLC9A2Q9UBY0 812 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 VPS4AQ9UN37 437 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-205ENST00000447267 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.48□□□□□ -1.53
SDCBP-205ENST00000447267 HES2Q9Y543 173 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 TNRC6BQ9UPQ9 1833 aaKnown RBP5.48□□□□□ -1.53
SDCBP-205ENST00000447267 CSMD2Q7Z408 3487 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 ATRQ13535 2644 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 A0A087WZ62 844 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 A0A1W2PNU3 283 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-205ENST00000447267 A0A1W2PQ27 194 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 A0A1W2PQ64 194 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 A0A1W2PQC6 194 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 PMS2P1A4D2B8 440 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 M0R2C6 588 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 BCAT2O15382 392 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-205ENST00000447267 NDUFS2O75306 463 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 RARGP13631 454 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 GABRG2P18507 467 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 LSSP48449 732 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 AMPD2Q01433 879 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 ST3GAL1Q11201 340 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 DRP2Q13474 957 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 HSP90AA2PQ14568 343 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-205ENST00000447267 TGIF1Q15583 401 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 KCNT1Q5JUK3 1230 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 WDR45BQ5MNZ6 344 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 UBXN11Q5T124 520 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 GPR158Q5T848 1215 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 LAYNQ6UX15 382 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 RTL10Q7L3V2 364 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 ELMOD1Q8N336 334 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 IL17RCQ8NAC3 791 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 HTR3CQ8WXA8 447 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 ACAP3Q96P50 834 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 NOX5Q96PH1 765 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 FDXACB1Q9BRP7 624 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-205ENST00000447267 FUCA2Q9BTY2 467 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 POLR1BQ9H9Y6 1135 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 ECHDC1Q9NTX5 307 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 MAP3K20Q9NYL2 800 aaKnown RBP5.47□□□□□ -1.53
SDCBP-205ENST00000447267 INSL5Q9Y5Q6 135 aa5.47□□□□□ -1.53
SDCBP-205ENST00000447267 SF3B1O75533 1304 aaKnown RBP eCLIP5.47□□□□□ -1.531e-6■■■■■ 66.8
SDCBP-205ENST00000447267 CCDC168Q8NDH2 2452 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 PDCD11Q14690 1871 aaKnown RBP5.46□□□□□ -1.54
SDCBP-205ENST00000447267 CASTOR2A6NHX0 329 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 MEI4A8MW99 385 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 PCDHGA12O60330 932 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 PRKCBP05771 671 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 SLC3A2P08195 630 aaKnown RBP5.46□□□□□ -1.54
SDCBP-205ENST00000447267 CDK4P11802 303 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 WT1P19544 449 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-205ENST00000447267 SREBF1P36956 1147 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 ROR1Q01973 937 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 TSHZ3Q63HK5 1081 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 EEF1DP3Q658K8 133 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 SP5Q6BEB4 398 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-205ENST00000447267 SWSAP1Q6NVH7 229 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 CATSPER4Q7RTX7 472 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 CKAP2LQ8IYA6 745 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 SLC34A3Q8N130 599 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 EID2Q8N6I1 236 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 ZNF461Q8TAF7 563 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 RCC1LQ96I51 464 aaKnown RBP5.46□□□□□ -1.54
SDCBP-205ENST00000447267 GCOM2Q9BZD3 368 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-205ENST00000447267 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.46□□□□□ -1.54
SDCBP-205ENST00000447267 ACBD3Q9H3P7 528 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 IL1RAPL2Q9NP60 686 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 OBP2AQ9NY56 170 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 MTRRQ9UBK8 725 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 TPCN1Q9ULQ1 816 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 CCL26Q9Y258 94 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 BACE2Q9Y5Z0 518 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 APCP25054 2843 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 CNTNAP2Q9UHC6 1331 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 RTTNQ86VV8 2226 aa5.46□□□□□ -1.54
SDCBP-205ENST00000447267 ZFC3H1O60293 1989 aaKnown RBP5.46□□□□□ -1.54
SDCBP-205ENST00000447267 COL1A2P08123 1366 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 C7orf72A4D263 438 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms