RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 CNGA2Q16280 664 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 TOP6BLQ8N6T0 577 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 RMDN2Q96LZ7 410 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 CHP1Q99653 195 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 CPNE1Q99829 537 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 CBWD1Q9BRT8 395 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 PHACTR1Q9C0D0 580 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 GNPTGQ9UJJ9 305 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 XRCC4Q13426 336 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 BRMS1LQ5PSV4 323 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 STRADAQ7RTN6 431 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 PAGE2Q7Z2X7 111 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 GLT6D1Q7Z4J2 308 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 RGL4Q8IZJ4 473 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 IL22Q9GZX6 179 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 DYTNA2CJ06 578 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 PDZK1P1A8MUH7 402 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 SPATA31C2B4DYI2 1134 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 GLUD1P00367 558 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 TM4SF1P30408 202 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 SCNN1BP51168 640 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 SNX30Q5VWJ9 437 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 GPRC5CQ9NQ84 441 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 ENTPD4Q9Y227 616 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 PTPN1P18031 435 aaKnown RBP8.75□□□□□ -1.01
PTPN3-204ENST00000446349 MDH1P40925 334 aaKnown RBP8.75□□□□□ -1.01
PTPN3-204ENST00000446349 ADCYAP1R1P41586 468 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 FMR1Q06787 632 aaKnown RBP eCLIP8.75□□□□□ -1.01
PTPN3-204ENST00000446349 KRR1Q13601 381 aaKnown RBP8.75□□□□□ -1.01
PTPN3-204ENST00000446349 SEL1L3Q68CR1 1132 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 SPOCD1Q6ZMY3 1216 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 ZFP28Q8NHY6 868 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 OR8D1Q8WZ84 308 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 SPATS2LQ9NUQ6 558 aaKnown RBP8.75□□□□□ -1.01
PTPN3-204ENST00000446349 LACTBL1A8MY62 500 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 KLRK1P26718 216 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 MMP13P45452 471 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 C21orf59P57076 290 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 SLC39A12Q504Y0 691 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 CBWD3Q5JTY5 395 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 CBWD5Q5RIA9 395 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 TTI2Q6NXR4 508 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 C11orf88Q6PI97 169 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 LRRC8DQ7L1W4 858 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 PFDN1O60925 122 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 SUPT7LO94864 414 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 GYPCP04921 128 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 RARGP13631 454 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 SELPP16109 830 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 TNNI3P19429 210 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 UBA1P22314 1058 aaKnown RBP8.74□□□□□ -1.01
PTPN3-204ENST00000446349 MMRN1Q13201 1228 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 MSLNQ13421 630 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-204ENST00000446349 ATP6AP1LQ52LC2 224 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 C10orf53Q8N6V4 93 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 LEMD2Q8NC56 503 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 RIT1Q92963 219 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 OSBPL6Q9BZF3 934 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 GPR88Q9GZN0 384 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 RUVBL2Q9Y230 463 aaKnown RBP8.74□□□□□ -1.01
PTPN3-204ENST00000446349 GNG14A0A1W2PPG7 69 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 RASSF9O75901 435 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 CDC16Q13042 620 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 CYP51A1Q16850 503 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 LONRF1Q17RB8 773 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 CRY2Q49AN0 593 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 RBM43Q6ZSC3 357 aaKnown RBP8.74□□□□□ -1.01
PTPN3-204ENST00000446349 SLC26A11Q86WA9 606 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 TEX9Q8N6V9 391 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 ACTR8Q9H981 624 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 CORO2BQ9UQ03 480 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 NFATC1O95644 943 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 JCHAINP01591 159 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 HK2P52789 917 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 DUSP28Q4G0W2 176 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 ATAT1Q5SQI0 421 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 ZNF606Q8WXB4 792 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 TUBGCP3Q96CW5 907 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 TMEM245Q9H330 911 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 SLC28A3Q9HAS3 691 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 ATAD3AQ9NVI7 634 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 AKAP10O43572 662 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 SLITRK3O94933 977 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 C4BPBP20851 252 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 TRIM60Q495X7 471 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 SPDYCQ5MJ68 293 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 SLC9A9Q8IVB4 645 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 LGI2Q8N0V4 545 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 OR56A4Q8NGH8 313 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 WNT8BQ93098 351 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 FICDQ9BVA6 458 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 SPATA5L1Q9BVQ7 753 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 PABPC3Q9H361 631 aaKnown RBP8.74□□□□□ -1.01
PTPN3-204ENST00000446349 TRIT1Q9H3H1 467 aaKnown RBP8.74□□□□□ -1.01
PTPN3-204ENST00000446349 PADI4Q9UM07 663 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 MFHAS1Q9Y4C4 1052 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 PPP1R37O75864 691 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 ENO3P13929 434 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-204ENST00000446349 GPD2P43304 727 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 MAGEA9P43362 315 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms