RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 NPY6RQ99463 290 aa12.71□□□□□ -0.37
LTBR-204ENST00000444814 SEMA4AQ9H3S1 761 aa12.71□□□□□ -0.37
LTBR-204ENST00000444814 METTL5Q9NRN9 209 aaKnown RBP12.71□□□□□ -0.37
LTBR-204ENST00000444814 COX16Q9P0S2 106 aa12.71□□□□□ -0.37
LTBR-204ENST00000444814 SLC27A6Q9Y2P4 619 aa12.71□□□□□ -0.37
LTBR-204ENST00000444814 A0A0A0MRY4 1105 aa12.7□□□□□ -0.38
LTBR-204ENST00000444814 RNF40O75150 1001 aa12.7□□□□□ -0.38
LTBR-204ENST00000444814 RTN2O75298 545 aa12.7□□□□□ -0.38
LTBR-204ENST00000444814 PAPSS2O95340 614 aaPredicted RBP12.7□□□□□ -0.38
LTBR-204ENST00000444814 EGFP01133 1207 aa12.7□□□□□ -0.38
LTBR-204ENST00000444814 KDSRQ06136 332 aa12.7□□□□□ -0.38
LTBR-204ENST00000444814 MTAPQ13126 283 aa12.7□□□□□ -0.38
LTBR-204ENST00000444814 CDH18Q13634 790 aa12.7□□□□□ -0.38
LTBR-204ENST00000444814 TAF5Q15542 800 aa12.7□□□□□ -0.38
LTBR-204ENST00000444814 ZC3H12AQ5D1E8 599 aaKnown RBP12.7□□□□□ -0.38
LTBR-204ENST00000444814 C10orf76Q5T2E6 689 aa12.7□□□□□ -0.38
LTBR-204ENST00000444814 ANKS1BQ7Z6G8 1248 aa12.7□□□□□ -0.38
LTBR-204ENST00000444814 VSTM4Q8IW00 320 aa12.7□□□□□ -0.38
LTBR-204ENST00000444814 CAMKK1Q8N5S9 505 aa12.7□□□□□ -0.38
LTBR-204ENST00000444814 WBP2Q969T9 261 aa12.7□□□□□ -0.38
LTBR-204ENST00000444814 METRNQ9UJH8 293 aa12.7□□□□□ -0.38
LTBR-204ENST00000444814 COL4A2P08572 1712 aa12.7□□□□□ -0.38
LTBR-204ENST00000444814 SIGLEC16A6NMB1 481 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 GPD1P21695 349 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 CASP14P31944 242 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 PTPN9P43378 593 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 CSTF1Q05048 431 aaKnown RBP12.69□□□□□ -0.38
LTBR-204ENST00000444814 PIK3R6Q5UE93 754 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 FYB2Q5VWT5 728 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 MON1BQ7L1V2 547 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 STRADAQ7RTN6 431 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 MCOLN2Q8IZK6 566 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 AHI1Q8N157 1196 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 ZNF687Q8N1G0 1237 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 ATRIPQ8WXE1 791 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 PCDHB18PQ96TA0 734 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 POLMQ9NP87 494 aaPredicted RBP12.69□□□□□ -0.38
LTBR-204ENST00000444814 PRMT8Q9NR22 394 aaPredicted RBP12.69□□□□□ -0.38
LTBR-204ENST00000444814 LCMT1Q9UIC8 334 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 TMEM59LQ9UK28 342 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 SHISA7A6NL88 538 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 H0Y626 953 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 TBL1XO60907 577 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 GYPCP04921 128 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 ATP5BP06576 529 aaKnown RBP12.69□□□□□ -0.38
LTBR-204ENST00000444814 TACR2P21452 398 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 HOXA6P31267 233 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 CNR2P34972 360 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 CXCR3P49682 368 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 DGKEP52429 567 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 AIF1P55008 147 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 FZD5Q13467 585 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 SLC12A1Q13621 1099 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 DMC1Q14565 340 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 MS4A13Q5J8X5 152 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 SYT13Q7L8C5 426 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 MFN1Q8IWA4 741 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 LGI2Q8N0V4 545 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 ZNF513Q8N8E2 541 aaPredicted RBP12.69□□□□□ -0.38
LTBR-204ENST00000444814 RPLP0P6Q8NHW5 317 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 BHMTQ93088 406 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 NT5C3BQ969T7 300 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 PIWIL1Q96J94 861 aaKnown RBP12.69□□□□□ -0.38
LTBR-204ENST00000444814 HAPLN3Q96S86 360 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 RETREG1Q9H6L5 497 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 LUC7LQ9NQ29 371 aaKnown RBP12.69□□□□□ -0.38
LTBR-204ENST00000444814 RBM12Q9NTZ6 932 aaKnown RBP12.69□□□□□ -0.38
LTBR-204ENST00000444814 DONSONQ9NYP3 566 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 PLK2Q9NYY3 685 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 STARD13Q9Y3M8 1113 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 PCDHGA2Q9Y5H1 932 aa12.69□□□□□ -0.38
LTBR-204ENST00000444814 CCDC163A0A0D9SF12 145 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 TMCO5BA8MYB1 307 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 AKR1B15C9JRZ8 316 aaPredicted RBP12.68□□□□□ -0.38
LTBR-204ENST00000444814 GFRA2O00451 464 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 TSPAN3O60637 253 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 RNF8O76064 485 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 FTLP02792 175 aaPredicted RBP12.68□□□□□ -0.38
LTBR-204ENST00000444814 HNRNPH3P31942 346 aaKnown RBP12.68□□□□□ -0.38
LTBR-204ENST00000444814 SLC6A11P48066 632 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 SEC13P55735 322 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 BYSLQ13895 437 aaKnown RBP12.68□□□□□ -0.38
LTBR-204ENST00000444814 STARD3Q14849 445 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 GAB4Q2WGN9 574 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 ZNF571Q7Z3V5 609 aaPredicted RBP12.68□□□□□ -0.38
LTBR-204ENST00000444814 USP33Q8TEY7 942 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 RXFP2Q8WXD0 754 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 ZNF653Q96CK0 615 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 RPRD1AQ96P16 312 aaPredicted RBP12.68□□□□□ -0.38
LTBR-204ENST00000444814 TBCBQ99426 244 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 TKTL2Q9H0I9 626 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 ZSCAN32Q9NX65 697 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 KIAA1522Q9P206 1035 aaPredicted RBP12.68□□□□□ -0.38
LTBR-204ENST00000444814 FBXO10Q9UK96 956 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 PLA2G4CQ9UP65 541 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 MIA3Q5JRA6 1907 aa12.68□□□□□ -0.38
LTBR-204ENST00000444814 A0A1B0GVM2 712 aa12.67□□□□□ -0.38
LTBR-204ENST00000444814 SSU72P8A0A1W2PR75 194 aa12.67□□□□□ -0.38
LTBR-204ENST00000444814 TCAF2A6NFQ2 919 aa12.67□□□□□ -0.38
LTBR-204ENST00000444814 C2CD4BA6NLJ0 364 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms