RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 HDAC3O15379 428 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 GSC2O15499 205 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 SSX5O60225 188 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PHF2O75151 1096 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 RHOBTB1O94844 696 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 EEF1B2P24534 225 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 EIF4A3P38919 411 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 GRIA2P42262 883 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 MAGEA4P43358 317 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 DNM2P50570 870 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 AQP4P55087 323 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 HSD17B7P56937 341 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 DLG4P78352 724 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ZNF200P98182 395 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 CD83Q01151 205 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PFKPQ01813 784 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 TRAF2Q12933 501 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 NCOA4Q13772 614 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 GCKRQ14397 625 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ANO4Q32M45 955 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 HP1BP3Q5SSJ5 553 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 BORAQ6PGQ7 559 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 AMIGO2Q86SJ2 522 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 DHDDSQ86SQ9 333 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 TTC7BQ86TV6 843 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CCDC103Q8IW40 242 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ZNF444Q8N0Y2 327 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 CCDC33Q8N5R6 958 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ATP6V0D2Q8N8Y2 350 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CCDC89Q8N998 374 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ARRDC4Q8NCT1 418 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PNMA1Q8ND90 353 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 GRPEL2Q8TAA5 225 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 SH3RF3Q8TEJ3 882 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 IPCEF1Q8WWN9 437 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 PYDC1Q8WXC3 89 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 FIG4Q92562 907 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 STAMQ92783 540 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PHF21AQ96BD5 680 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 TLCD1Q96CP7 247 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 MRRFQ96E11 262 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 ZNF486Q96H40 463 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 MAP6Q96JE9 813 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 MAGEB18Q96M61 343 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CADM1Q9BY67 442 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 NAPBQ9H115 298 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PABPC3Q9H361 631 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 SEMA6BQ9H3T3 888 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ARMT1Q9H993 441 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 JMJD4Q9H9V9 463 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 AVENQ9NQS1 362 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 FAM207AQ9NSI2 230 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 ACTR3BQ9P1U1 418 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PFDN2Q9UHV9 154 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 RIMKLBQ9ULI2 386 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 USP18Q9UMW8 372 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CHKBQ9Y259 395 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 INPP5FQ9Y2H2 1132 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 DAGLAQ9Y4D2 1042 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 AP4S1Q9Y587 144 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 SQORQ9Y6N5 450 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ITSN1Q15811 1721 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ABCA2Q9BZC7 2435 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 A0A088AWK7 358 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 RAB19A4D1S5 217 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ARHGEF35A5YM69 484 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 FAM172BPA6NC97 362 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PRR23AA6NEV1 266 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CENPXA8MT69 81 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 USP17L5A8MUK1 530 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PSMD12O00232 456 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 WNT7AO00755 349 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ITM2AO43736 263 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 BCL10O95999 233 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 AVPP01185 164 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PRKCBP05771 671 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 APOA4P06727 396 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ENO1P06733 434 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 PSMC3P17980 439 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 M6PRP20645 277 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CD9P21926 228 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 AMPD1P23109 780 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ADORA2AP29274 412 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CTGFP29279 349 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CRABP2P29373 138 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ABCG1P45844 678 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 YARSP54577 528 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 POU6F2P78424 691 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 RHAGQ02094 409 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 GNA12Q03113 381 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ABCB5Q2M3G0 1257 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 MDH1BQ5I0G3 518 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ZBTB41Q5SVQ8 909 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 SULT1C3Q6IMI6 304 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PGM2L1Q6PCE3 622 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 RIPOR1Q6ZS17 1223 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 MFSD6Q6ZSS7 791 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 RAPH1Q70E73 1250 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 KCTD1Q719H9 257 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 RRAGAQ7L523 313 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms