RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 CCT8L1PA6NM43 557 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 C2CD4DB7Z1M9 353 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 HPDP32754 393 aaPredicted RBP7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 GTF2H1P32780 548 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 BCAT1P54687 386 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 CDO1Q16878 200 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 CCDC157Q569K6 752 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 ZC3H14Q6PJT7 736 aaKnown RBP7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 FAM35AQ86V20 835 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 CHSY1Q86X52 802 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 CYP4X1Q8N118 509 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 CELF5Q8N6W0 485 aaKnown RBP7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 BCL7CQ8WUZ0 217 aaPredicted RBP7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 NXPE3Q969Y0 559 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 BTBD6Q96KE9 485 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 COL25A1Q9BXS0 654 aaPredicted RBP7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 ARHGEF3Q9NR81 526 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 WHRNQ9P202 907 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 DEC1Q9P2X7 70 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 USTQ9Y2C2 406 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 SNX24Q9Y343 169 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 STYXL1Q9Y6J8 313 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 ZFP37Q9Y6Q3 630 aaPredicted RBP7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 NUMBLQ9Y6R0 609 aa7.65□□□□□ -1.19
CDC42BPA-208ENST00000442054 O00370 1275 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 ATMINO43313 823 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 ADH1CP00326 375 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 ACADMP11310 421 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 VDRP11473 427 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 LAMP2P13473 410 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 CYP11B1P15538 503 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 LMO2P25791 158 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 CLCN4P51793 760 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 PTK6Q13882 451 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 SMAD2Q15796 467 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 C2orf27AQ580R0 203 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 TCEAL8Q8IYN2 117 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 LRRC34Q8IZ02 419 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 C3orf58Q8NDZ4 430 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 ITFG1Q8TB96 612 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 DENND1AQ8TEH3 1009 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 NSMCE1Q8WV22 266 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 UBLCP1Q8WVY7 318 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 SNX19Q92543 992 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 EDEM1Q92611 657 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 PCED1BQ96HM7 432 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 SGSM3Q96HU1 749 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 FUBP3Q96I24 572 aaKnown RBP eCLIP7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 RUFY1Q96T51 708 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 NCAPGQ9BPX3 1015 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 DDX23Q9BUQ8 820 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 BBS2Q9BXC9 721 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 TRIM7Q9C029 511 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 SMG9Q9H0W8 520 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 EBF2Q9HAK2 575 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 GDE1Q9NZC3 331 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 KIAA1257Q9ULG3 409 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 CPQQ9Y646 472 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 PIAS3Q9Y6X2 628 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 NEMP1O14524 444 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 SNX3O60493 162 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 CDH18Q13634 790 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 ZNF268Q14587 947 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 CLEC16AQ2KHT3 1053 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 ARL13BQ3SXY8 428 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 ZACNQ401N2 412 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 RWDD4Q6NW29 188 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 CCDC137Q6PK04 289 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 MON1BQ7L1V2 547 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 ANKS4BQ8N8V4 417 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 C12orf29Q8N999 325 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 SH3RF2Q8TEC5 729 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 DEPDC1BQ8WUY9 529 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 RSAD2Q8WXG1 361 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 CTNNBL1Q8WYA6 563 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 ZFYVE19Q96K21 471 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 TMEM209Q96SK2 561 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 CDK5RAP1Q96SZ6 601 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 PTPRHQ9HD43 1115 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 CYLDQ9NQC7 956 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 TBC1D14Q9P2M4 693 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 FBXW11Q9UKB1 542 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 SIT1Q9Y3P8 196 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 PTPRJQ12913 1337 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 PRR23AA6NEV1 266 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 TMEM110-MUSTN1A8MSY1 372 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 PI4K2BG5E9Z4 385 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 TMEM189-UBE2V1I3L0A0 370 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 FAM189A1O60320 539 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 TSPAN3O60637 253 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 RNF8O76064 485 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 ALDH1A2O94788 518 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 APODP05090 189 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 CDR2Q01850 454 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 LRRC32Q14392 662 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 SKIDA1Q1XH10 827 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 DCAF6Q58WW2 860 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 SYCE2Q6PIF2 218 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 OTUD6BQ8N6M0 293 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms