RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 CPSF3Q9UKF6 684 aaKnown RBP6.12□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CROTQ9UKG9 612 aa6.12□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 USP18Q9UMW8 372 aa6.12□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.12□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 FMN2Q9NZ56 1722 aa6.12□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ARHGEF10O15013 1369 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ABCC4O15439 1325 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SRGAP3O43295 1099 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 AP5Z1O43299 807 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PROM1O43490 865 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ERAL1O75616 437 aaKnown RBP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 FUCA1P04066 466 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 NPR1P16066 1061 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CTSSP25774 331 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CSTF2P33240 577 aaKnown RBP eCLIP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CPA2P48052 419 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PREPP48147 710 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 EPHA5P54756 1037 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 OLR1P78380 273 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 FOXO4P98177 505 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 COL9A3Q14050 684 aaPredicted RBP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ADIPOQQ15848 244 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 TSTQ16762 297 aaKnown RBP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 DCLRE1AQ6PJP8 1040 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SLC22A25Q6T423 547 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ZNF600Q6ZNG1 722 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CILP2Q8IUL8 1156 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SIAH1Q8IUQ4 282 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 THNSL1Q8IYQ7 743 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PLD6Q8N2A8 252 aaKnown RBP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 GLB1L3Q8NCI6 653 aaPredicted RBP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 OR8K1Q8NGG5 319 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 NEDD1Q8NHV4 660 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 EDARADDQ8WWZ3 215 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ART5Q96L15 291 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PSKH2Q96QS6 385 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ATP6V0BQ99437 205 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 TBCDQ9BTW9 1192 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 FUCA2Q9BTY2 467 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SPZ1Q9BXG8 430 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 EIF2AQ9BY44 585 aaKnown RBP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 XKR8Q9H6D3 395 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PSTPIP2Q9H939 334 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SNTG1Q9NSN8 517 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 RGL1Q9NZL6 768 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 COX16Q9P0S2 106 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PEAK1Q9H792 1746 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SBNO1A3KN83 1393 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 FLT4P35916 1363 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ATP8B3O60423 1300 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 A0A0U1RQK1 487 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ZNF320A2RRD8 509 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PDLIM1O00151 329 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PSMD9O00233 223 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SYNCRIPO60506 623 aaKnown RBP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 LEFTY1O75610 366 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ZNF189O75820 626 aaPredicted RBP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 LRG1P02750 347 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 QDPRP09417 244 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 EPB41P11171 864 aaKnown RBP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 TYRP14679 529 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 HNRNPLP14866 589 aaKnown RBP eCLIP6.11□□□□□ -1.439e-6■□□□□ 8.2
ALMS1-IT1-201ENST00000441587 HPGDP15428 266 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 TLX1P31314 330 aaPredicted RBP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 STAT5AP42229 794 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 AMPHP49418 695 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ACTR1AP61163 376 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 TFAP4Q01664 338 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 RALGDSQ12967 914 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CAMK2DQ13557 499 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 NOMO1Q15155 1222 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 C3orf38Q5JPI3 329 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 KHDC1LQ5JSQ8 128 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 HLA-DQA1Q5Y7H0 255 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 TANGO2Q6ICL3 276 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 C8orf74Q6P047 294 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 RNF111Q6ZNA4 994 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 C22orf34Q6ZV56 151 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ZNF765Q7L2R6 523 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 TSPYL5Q86VY4 417 aaPredicted RBP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CHD1LQ86WJ1 897 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CDH26Q8IXH8 852 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CNTROBQ8N137 903 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 AGGF1Q8N302 714 aaeCLIP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 Q8NFD4 153 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 LILRB4Q8NHJ6 448 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 B4GALNT2Q8NHY0 566 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 FAM81AQ8TBF8 368 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 STT3BQ8TCJ2 826 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 MAGEC3Q8TD91 643 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SH3RF3Q8TEJ3 882 aaPredicted RBP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 GAB3Q8WWW8 586 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SEPT1Q8WYJ6 367 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 WASF1Q92558 559 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 RILPL2Q969X0 211 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CLPTM1LQ96KA5 538 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 NUDCD1Q96RS6 583 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 BCL7BQ9BQE9 202 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SIKE1Q9BRV8 207 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms