RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 SCYL2Q6P3W7 929 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 GALNT18Q6P9A2 607 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 TTC33Q6PID6 262 aaPredicted RBP7.74□□□□□ -1.17
HDAC9-214ENST00000441542 BNC2Q6ZN30 1099 aaPredicted RBP7.74□□□□□ -1.17
HDAC9-214ENST00000441542 OTOP1Q7RTM1 612 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 MAVSQ7Z434 540 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 KRT77Q7Z794 578 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 SETD3Q86TU7 594 aaPredicted RBP7.74□□□□□ -1.17
HDAC9-214ENST00000441542 KBTBD6Q86V97 674 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 MPP5Q8N3R9 675 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 NAT8LQ8N9F0 302 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 CLIP3Q96DZ5 547 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 FAM20AQ96MK3 541 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 C7orf26Q96N11 449 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 ZMAT2Q96NC0 199 aaKnown RBP7.74□□□□□ -1.17
HDAC9-214ENST00000441542 OR52B2Q96RD2 323 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 THAP1Q9NVV9 213 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 GPATCH2LQ9NWQ4 482 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 CNTN3Q9P232 1028 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 SFMBT1Q9UHJ3 866 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 PRR12Q9ULL5 1215 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 ZNRF3Q9ULT6 936 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 MYRFQ9Y2G1 1151 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 SLIT2O94813 1529 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 LOC102724428A0A0B4J2F2 783 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 KANSL1LA0AUZ9 987 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 TFE3P19532 575 aaPredicted RBP7.74□□□□□ -1.17
HDAC9-214ENST00000441542 HMOX2P30519 316 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 GRIA1P42261 906 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 PHKA2P46019 1235 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 CDK9P50750 372 aaKnown RBP7.74□□□□□ -1.17
HDAC9-214ENST00000441542 SIK1P57059 783 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 NUP107P57740 925 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 XKR9Q5GH70 373 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 GPATCH4Q5T3I0 446 aaKnown RBP7.74□□□□□ -1.17
HDAC9-214ENST00000441542 FAM219BQ5XKK7 198 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 NANOGP8Q6NSW7 305 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 DCDC5Q6ZRR9 648 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 SPNS2Q8IVW8 549 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.74□□□□□ -1.17
HDAC9-214ENST00000441542 ISOC1Q96CN7 298 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 KLHL32Q96NJ5 620 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 SLC29A1Q99808 456 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 NRDE2Q9H7Z3 1164 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 NOL11Q9H8H0 719 aaKnown RBP7.74□□□□□ -1.17
HDAC9-214ENST00000441542 POLR1BQ9H9Y6 1135 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 ZFYVE28Q9HCC9 887 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 COMMD8Q9NX08 183 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 AURKCQ9UQB9 309 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 N6AMT1Q9Y5N5 214 aa7.74□□□□□ -1.17
HDAC9-214ENST00000441542 GPC6Q9Y625 555 aaPredicted RBP7.74□□□□□ -1.17
HDAC9-214ENST00000441542 NUP188Q5SRE5 1749 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 GMNNO75496 209 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 GRAP2O75791 330 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 KRT38O76015 456 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 ZBED1O96006 694 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 GNAO1P09471 354 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 ARSAP15289 507 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 AOC1P19801 751 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 MAP4P27816 1152 aaKnown RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 SESN2P58004 480 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 CTBSQ01459 385 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 DPYSL3Q14195 570 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 TEX44Q53QW1 395 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 AARS2Q5JTZ9 985 aaKnown RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 TEDDM1Q5T9Z0 273 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 ATG14Q6ZNE5 492 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 CMC1Q7Z7K0 106 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 CHCHD4Q8N4Q1 142 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 CAPSLQ8WWF8 208 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 MRPL46Q9H2W6 279 aaKnown RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 EPB41L1Q9H4G0 881 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 DHX35Q9H5Z1 703 aaKnown RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 MARCH7Q9H992 704 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 IL1RL2Q9HB29 575 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 POLE4Q9NR33 117 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 CYP26B1Q9NR63 512 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 MKS1Q9NXB0 559 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 DDX56Q9NY93 547 aaKnown RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 GPRC5DQ9NZD1 345 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 GMPR2Q9P2T1 348 aaKnown RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 IP6K2Q9UHH9 426 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 CORINQ9Y5Q5 1042 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 WNK3Q9BYP7 1800 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 WDR46O15213 610 aaKnown RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 AKAP10O43572 662 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 DENRO43583 198 aaKnown RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 ENTPD3O75355 529 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 TIPRLO75663 272 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 RFPL1O75677 317 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 FBXO21O94952 628 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 HLA-DRAP01903 254 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 TAF1P21675 1872 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 ADORA2AP29274 412 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 SLC18A2Q05940 514 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 CACNA1SQ13698 1873 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 MON1BQ7L1V2 547 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 ADGRG6Q86SQ4 1221 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 HEATR4Q86WZ0 1026 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 ADGRF2Q8IZF7 708 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms