RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 MICU3Q86XE3 530 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 PLA2G4DQ86XP0 818 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 KRT78Q8N1N4 520 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 DCBLD1Q8N8Z6 715 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 FANCBQ8NB91 859 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 C3orf20Q8ND61 904 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 SLC17A8Q8NDX2 589 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 NSUN6Q8TEA1 469 aaKnown RBP3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 PIBF1Q8WXW3 757 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 C1GALT1C1Q96EU7 318 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 PBKQ96KB5 322 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 TNIP3Q96KP6 325 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 MRGPRX4Q96LA9 322 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 SGCZQ96LD1 299 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 TIGD1Q96MW7 591 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZNF830Q96NB3 372 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 OSBPL9Q96SU4 736 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 RIOK1Q9BRS2 568 aaKnown RBP3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 UBAC1Q9BSL1 405 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 BRIP1Q9BX63 1249 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 TLR10Q9BXR5 811 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 SLC26A6Q9BXS9 759 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 CRNKL1Q9BZJ0 848 aaKnown RBP3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 TRIM5Q9C035 493 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 KLK15Q9H2R5 256 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 CPNE5Q9HCH3 593 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 ALG13Q9NP73 1137 aaKnown RBP3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 KLC4Q9NSK0 619 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 GJB4Q9NTQ9 266 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 LUZP4Q9P127 313 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 SRP68Q9UHB9 627 aaKnown RBP3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 PNMA2Q9UL42 364 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 L1RE1Q9UN81 338 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 PCDHGB6Q9Y5F9 930 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 NR2E3Q9Y5X4 410 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 NUP98P52948 1817 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 NWD2Q9ULI1 1742 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 FAM237AA0A1B0GTK4 181 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 SMTNL1A8MU46 457 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 RASA4BC9J798 803 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 POLRMTO00411 1230 aaKnown RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 NPHP1O15259 732 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 RASA4O43374 803 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 RANBP6O60518 1105 aaKnown RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 PQBP1O60828 265 aaKnown RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 WDHD1O75717 1129 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 MMP1P03956 469 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 ALDH2P05091 517 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 LDHCP07864 332 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 CALM1P0DP23 149 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 CALM2P0DP24 149 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 CALM3P0DP25 149 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 RARBP10826 455 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 PFKFB1P16118 471 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 XBP1P17861 261 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 MALP21145 153 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 MARCKSP29966 332 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 TM4SF1P30408 202 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 RFC4P35249 363 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 HALP42357 657 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 PIK3CGP48736 1102 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 NDUFV1P49821 464 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 NDUFA8P51970 172 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 MAPK10P53779 464 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 ATXN1P54253 815 aaKnown RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 TPM4P67936 248 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 RBM6P78332 1123 aaKnown RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 AKAP17AQ02040 695 aaKnown RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 MECOMQ03112 1051 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 CHAF1AQ13111 956 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 KIAA0753Q2KHM9 967 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 PGS1Q32NB8 556 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 SBK1Q52WX2 424 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 RILPL1Q5EBL4 403 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 COLEC12Q5KU26 742 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 DNTTIP2Q5QJE6 756 aaKnown RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 TSTD2Q5T7W7 516 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 RESP18Q5W5W9 173 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 CTR9Q6PD62 1173 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 C1orf228Q6PIY5 440 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 SARM1Q6SZW1 724 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 C11orf57Q6ZUT1 292 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 SMIM5Q71RC9 77 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 CCDC186Q7Z3E2 898 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZNF804AQ7Z570 1209 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 CEP57L1Q8IYX8 460 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 ANKRD42Q8N9B4 389 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 Q8NA96 180 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 SPC24Q8NBT2 197 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 PDPRQ8NCN5 879 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 HASPINQ8TF76 798 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 SDR42E1Q8WUS8 393 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 ATRIPQ8WXE1 791 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 NSUN4Q96CB9 384 aaKnown RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 MTFMTQ96DP5 389 aaKnown RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 HAPLN3Q96S86 360 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 NELL2Q99435 816 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 BPIFA3Q9BQP9 254 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 HERPUD2Q9BSE4 406 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 RNF26Q9BY78 433 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms