RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ARHGAP42A6NI28 874 aa13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 SPECC1L-ADORA2AF8WAN1 911 aa13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 RNF103O00237 685 aa13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 ADCY6O43306 1168 aa13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 GSRP00390 522 aa13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 LMNAP02545 664 aaKnown RBP13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 LAMC2Q13753 1193 aa13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 R3HDM1Q15032 1099 aaKnown RBP13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 GRIK4Q16099 956 aa13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 AEBP2Q6ZN18 517 aaPredicted RBP13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 TMPRSS6Q8IU80 811 aa13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 C10orf107Q8IVU9 208 aa13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 PGBD4Q96DM1 585 aa13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 P2RY11Q96G91 374 aa13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 PANX3Q96QZ0 392 aa13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 XPNPEP3Q9NQH7 507 aa13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 MOCS1Q9NZB8 636 aa13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 EMCNQ9ULC0 261 aa13.96□□□□□ -0.18
HERPUD1-204ENST00000439977 ZMPSTE24O75844 475 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 ARRB2P32121 409 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 GNL1P36915 607 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 CCNFP41002 786 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 STILQ15468 1287 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 RALGPS1Q5JS13 557 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 C1orf146Q5VVC0 180 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 NAIF1Q69YI7 327 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 MAMDC4Q6UXC1 1216 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 SCUBE1Q8IWY4 988 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 ULK2Q8IYT8 1036 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 LINC01465Q8N7H1 131 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 CCDC124Q96CT7 223 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 DDX50Q9BQ39 737 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 CYP4F11Q9HBI6 524 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 SYBUQ9NX95 663 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 SLC7A8Q9UHI5 535 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 CORO1CQ9ULV4 474 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 TRIP11Q15643 1979 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 GOLGA8TH3BQL2 631 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 BEST1O76090 585 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 RECQL4O94761 1208 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 TKTP29401 623 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 ARL4AP40617 200 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 SULT1E1P49888 294 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 KLC1Q07866 573 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 ADIGQ0VDE8 80 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 PPP2R5DQ14738 602 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 PACS1Q6VY07 963 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 GSTCDQ8NEC7 633 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 PPP1R36Q96LQ0 422 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 QKIQ96PU8 341 aaKnown RBP eCLIP13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 APOL2Q9BQE5 337 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 OXCT2Q9BYC2 517 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 FRMD8Q9BZ67 464 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 MAN1C1Q9NR34 630 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 TMEM216Q9P0N5 145 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 TAGLN3Q9UI15 199 aa13.95□□□□□ -0.18
HERPUD1-204ENST00000439977 SNNO75324 88 aaPredicted RBP13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 GRM5P41594 1212 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 MAGEA6P43360 314 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 SLC1A6P48664 564 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 EPHB1P54762 984 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 TRIM42Q8IWZ5 723 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 ARNTL2Q8WYA1 636 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 LRRC39Q96DD0 335 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 MTBPQ96DY7 904 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 CCDC106Q9BWC9 280 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 PRDM12Q9H4Q4 367 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 THAP1Q9NVV9 213 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 A0A0A0MRY4 1105 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 A6NHS1 94 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 SDR42E2A6NKP2 422 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 PDE5AO76074 875 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 TYK2P29597 1187 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 SEMA5AQ13591 1074 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 SYPL2Q5VXT5 272 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 C9orf57Q5W0N0 161 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 DPY19L2Q6NUT2 758 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 PID1Q7Z2X4 250 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 PIGZQ86VD9 579 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 ANKRD13AQ8IZ07 590 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 KBTBD7Q8WVZ9 684 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 SPATA13Q96N96 652 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 CAB39LQ9H9S4 337 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 KRT82Q9NSB4 513 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.94□□□□□ -0.182e-11■■■■□ 20.8
HERPUD1-204ENST00000439977 RPS6KL1Q9Y6S9 549 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 PAPPA2Q9BXP8 1791 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 ACADSP16219 412 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 NCF2P19878 526 aaPredicted RBP13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 TPSB2P20231 275 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 BST2Q10589 180 aaKnown RBP13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 ITGA9Q13797 1035 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 TPSAB1Q15661 275 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 DLG2Q15700 870 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 TEDDM1Q5T9Z0 273 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 RNF220Q5VTB9 566 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 MBLAC2Q68D91 279 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 SLC26A9Q7LBE3 791 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 ANKRD52Q8NB46 1076 aa13.94□□□□□ -0.18
HERPUD1-204ENST00000439977 PIWIL2Q8TC59 973 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms