RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 LSM8O95777 96 aaKnown RBP13.95□□□□□ -0.18
PCNX3-202ENST00000439247 SRGAP2CP0DJJ0 459 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 SRGAP2BP0DMP2 458 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 TCF7P36402 384 aaPredicted RBP13.95□□□□□ -0.18
PCNX3-202ENST00000439247 SLC9B1Q4ZJI4 515 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 CYP4V2Q6ZWL3 525 aaPredicted RBP13.95□□□□□ -0.18
PCNX3-202ENST00000439247 IFNLR1Q8IU57 520 aaPredicted RBP13.95□□□□□ -0.18
PCNX3-202ENST00000439247 HACE1Q8IYU2 909 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 LILRA2Q8N149 483 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 PQLC1Q8N2U9 271 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 MAPK15Q8TD08 544 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 HSPBAP1Q96EW2 488 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 MRPL1Q9BYD6 325 aaKnown RBP13.95□□□□□ -0.18
PCNX3-202ENST00000439247 ZNF195O14628 629 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 WDR46O15213 610 aaKnown RBP13.95□□□□□ -0.18
PCNX3-202ENST00000439247 FBXO21O94952 628 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 KLHL2O95198 593 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 AMHP03971 560 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 PRKCGP05129 697 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 EIF4BP23588 611 aaKnown RBP13.95□□□□□ -0.18
PCNX3-202ENST00000439247 TPP2P29144 1249 aaPredicted RBP13.95□□□□□ -0.18
PCNX3-202ENST00000439247 SLC10A2Q12908 348 aaPredicted RBP13.95□□□□□ -0.18
PCNX3-202ENST00000439247 ITGA9Q13797 1035 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 NOL9Q5SY16 702 aaKnown RBP13.95□□□□□ -0.18
PCNX3-202ENST00000439247 MAP3K21Q5TCX8 1036 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 PQLC3Q8N755 202 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 MCPH1Q8NEM0 835 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 RIN3Q8TB24 985 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 DEPTORQ8TB45 409 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.95□□□□□ -0.18
PCNX3-202ENST00000439247 TMIGD2Q96BF3 282 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 SIGLEC10Q96LC7 697 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 PLEKHG4BQ96PX9 1271 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 TWNKQ96RR1 684 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 ITGA11Q9UKX5 1188 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 STX16-NPEPL1H3BU86 382 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 SPAG6O75602 509 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 RGS20O76081 388 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 COX4I1P13073 169 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 BAATQ14032 418 aaPredicted RBP13.95□□□□□ -0.18
PCNX3-202ENST00000439247 CA9Q16790 459 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 BSPRYQ5W0U4 402 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 CASC4Q6P4E1 433 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 CES3Q6UWW8 571 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 UBA3Q8TBC4 463 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 LPAR1Q92633 364 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 LENG8Q96PV6 779 aaPredicted RBP13.95□□□□□ -0.18
PCNX3-202ENST00000439247 TMEM216Q9P0N5 145 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 BTBD7Q9P203 1132 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 PAPPA2Q9BXP8 1791 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 CASQ2O14958 399 aaPredicted RBP13.94□□□□□ -0.18
PCNX3-202ENST00000439247 CFLARO15519 480 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 ZBED1O96006 694 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 XRCC1P18887 633 aaPredicted RBP13.94□□□□□ -0.18
PCNX3-202ENST00000439247 MAGEA10P43363 369 aaPredicted RBP13.94□□□□□ -0.18
PCNX3-202ENST00000439247 ABCG1P45844 678 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 EMP3P54852 163 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 MTTPP55157 894 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 TAP1Q03518 808 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 BPTFQ12830 3046 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 CYTH1Q15438 398 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 EML3Q32P44 896 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 TREML2Q5T2D2 321 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 FAM102AQ5T9C2 384 aaPredicted RBP13.94□□□□□ -0.18
PCNX3-202ENST00000439247 PTAR1Q7Z6K3 402 aaPredicted RBP13.94□□□□□ -0.18
PCNX3-202ENST00000439247 MARVELD2Q8N4S9 558 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 PLD5Q8N7P1 536 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 FAM156AQ8NDB6 213 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 GAB3Q8WWW8 586 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 ATG4CQ96DT6 458 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 ZNF512Q96ME7 567 aaPredicted RBP13.94□□□□□ -0.18
PCNX3-202ENST00000439247 NIF3L1Q9GZT8 377 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 SDCBP2Q9H190 292 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 STYXL1Q9Y6J8 313 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 WDR27A2RRH5 827 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 NEMP1O14524 444 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 BIRC5O15392 142 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 TCN1P20061 433 aaPredicted RBP13.94□□□□□ -0.18
PCNX3-202ENST00000439247 ASPAP45381 313 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 CCR10P46092 362 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 NUDT2P50583 147 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 PGGT1BP53609 377 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 ADARP55265 1226 aaKnown RBP13.94□□□□□ -0.18
PCNX3-202ENST00000439247 COG7P83436 770 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 ZNF781Q8N8C0 355 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 OR52B2Q96RD2 323 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 AS3MTQ9HBK9 375 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 GNEQ9Y223 722 aaKnown RBP13.94□□□□□ -0.18
PCNX3-202ENST00000439247 CSADQ9Y600 493 aa13.94□□□□□ -0.18
PCNX3-202ENST00000439247 FAM159BA6NKW6 160 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 PLIN3O60664 434 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 KRT19P08727 400 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 IL4RP24394 825 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 GTF2A2P52657 109 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 THOP1P52888 689 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 CMC1Q7Z7K0 106 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 GSDMBQ8TAX9 411 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 JADE3Q92613 823 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 WDR55Q9H6Y2 383 aaPredicted RBP13.93□□□□□ -0.18
PCNX3-202ENST00000439247 COG4Q9H9E3 785 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms