RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 PCDHB18PQ96TA0 734 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 NPY6RQ99463 290 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 ZDHHC4Q9NPG8 344 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 DDIT4Q9NX09 232 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.48■□□□□ 0.55
NCSTN-208ENST00000438008 SLC12A6Q9UHW9 1150 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 SMG5Q9UPR3 1016 aaKnown RBP18.48■□□□□ 0.55
NCSTN-208ENST00000438008 VPS13AQ96RL7 3174 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 NPC1O15118 1278 aa18.47■□□□□ 0.55
NCSTN-208ENST00000438008 TIMM44O43615 452 aa18.47■□□□□ 0.55
NCSTN-208ENST00000438008 MOCS2O96007 188 aaPredicted RBP18.47■□□□□ 0.55
NCSTN-208ENST00000438008 FANCCQ00597 558 aa18.47■□□□□ 0.55
NCSTN-208ENST00000438008 CENPCQ03188 943 aa18.47■□□□□ 0.55
NCSTN-208ENST00000438008 ARID5AQ03989 594 aa18.47■□□□□ 0.55
NCSTN-208ENST00000438008 SIM2Q14190 667 aaPredicted RBP18.47■□□□□ 0.55
NCSTN-208ENST00000438008 EIF4HQ15056 248 aaKnown RBP18.47■□□□□ 0.55
NCSTN-208ENST00000438008 E2F5Q15329 346 aa18.47■□□□□ 0.55
NCSTN-208ENST00000438008 C2CD6Q53TS8 623 aa18.47■□□□□ 0.55
NCSTN-208ENST00000438008 FAM102AQ5T9C2 384 aaPredicted RBP18.47■□□□□ 0.55
NCSTN-208ENST00000438008 IRF2BP2Q7Z5L9 587 aa18.47■□□□□ 0.55
NCSTN-208ENST00000438008 KIAA0907Q7Z7F0 614 aaPredicted RBP18.47■□□□□ 0.55
NCSTN-208ENST00000438008 ZNF557Q8N988 423 aaPredicted RBP18.47■□□□□ 0.55
NCSTN-208ENST00000438008 HJURPQ8NCD3 748 aaPredicted RBP18.47■□□□□ 0.55
NCSTN-208ENST00000438008 PGAP3Q96FM1 320 aaPredicted RBP18.47■□□□□ 0.55
NCSTN-208ENST00000438008 PRICKLE1Q96MT3 831 aaPredicted RBP18.47■□□□□ 0.55
NCSTN-208ENST00000438008 GABRG3Q99928 467 aa18.47■□□□□ 0.55
NCSTN-208ENST00000438008 EDEM3Q9BZQ6 932 aa18.47■□□□□ 0.55
NCSTN-208ENST00000438008 NUCKS1Q9H1E3 243 aaKnown RBP18.47■□□□□ 0.55
NCSTN-208ENST00000438008 POLMQ9NP87 494 aaPredicted RBP18.47■□□□□ 0.55
NCSTN-208ENST00000438008 XPO7Q9UIA9 1087 aaKnown RBP18.47■□□□□ 0.55
NCSTN-208ENST00000438008 TMEM59LQ9UK28 342 aa18.47■□□□□ 0.55
NCSTN-208ENST00000438008 STAP1Q9ULZ2 295 aa18.47■□□□□ 0.55
NCSTN-208ENST00000438008 USP34Q70CQ2 3546 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 GOLGA6L19H0YKK7 550 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 M0QYT0 321 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 TBL1XO60907 577 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 ALDH1A2O94788 518 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 ABCB4P21439 1286 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 HLA-FP30511 346 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 RNASE9P60153 205 aaKnown RBP18.46■□□□□ 0.55
NCSTN-208ENST00000438008 PTP4A2Q12974 167 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 SRSF5Q13243 272 aaKnown RBP18.46■□□□□ 0.55
NCSTN-208ENST00000438008 CLEC16AQ2KHT3 1053 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 FIGNQ5HY92 759 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 OTUD1Q5VV17 481 aaPredicted RBP18.46■□□□□ 0.55
NCSTN-208ENST00000438008 SDE2Q6IQ49 451 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 MMS22LQ6ZRQ5 1243 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 PHF13Q86YI8 300 aaPredicted RBP18.46■□□□□ 0.55
NCSTN-208ENST00000438008 CHPFQ8IZ52 775 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 WFIKKN2Q8TEU8 576 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 UCMAQ8WVF2 138 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 RUBCNQ92622 972 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 MYEOVQ96EZ4 313 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 ACOX2Q99424 681 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 AGPAT1Q99943 283 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 TTYH3Q9C0H2 523 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 ELOVL2Q9NXB9 296 aa18.46■□□□□ 0.55
NCSTN-208ENST00000438008 THAP10Q9P2Z0 257 aaPredicted RBP18.46■□□□□ 0.55
NCSTN-208ENST00000438008 A0A1W2PQF6 199 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 TYW5A2RUC4 315 aaKnown RBP18.45■□□□□ 0.54
NCSTN-208ENST00000438008 RPP40O75818 363 aaKnown RBP18.45■□□□□ 0.54
NCSTN-208ENST00000438008 F9P00740 461 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 HOXB2P14652 356 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 TACR2P21452 398 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 CXCR3P49682 368 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 GSCP56915 257 aaPredicted RBP18.45■□□□□ 0.54
NCSTN-208ENST00000438008 RPS24P62847 133 aaKnown RBP18.45■□□□□ 0.54
NCSTN-208ENST00000438008 NME3Q13232 169 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 ENPP2Q13822 863 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 SLC25A52Q3SY17 297 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 RAP1GAP2Q684P5 730 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 TMEM215Q68D42 235 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 ANO7Q6IWH7 933 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 BNIPLQ7Z465 357 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 MDGA1Q8NFP4 955 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 SLC30A5Q8TAD4 765 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 FIBINQ8TAL6 211 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 RNF34Q969K3 372 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 LMLNQ96KR4 655 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 PRMT1Q99873 361 aaKnown RBP18.45■□□□□ 0.54
NCSTN-208ENST00000438008 SYT11Q9BT88 431 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 ADAM33Q9BZ11 813 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 CD248Q9HCU0 757 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 CALCOCO1Q9P1Z2 691 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 RAB23Q9ULC3 237 aa18.45■□□□□ 0.54
NCSTN-208ENST00000438008 SYNJ2BP-COX16A0A087WUM0 186 aa18.44■□□□□ 0.54
NCSTN-208ENST00000438008 GOLGA8SH3BPF8 625 aa18.44■□□□□ 0.54
NCSTN-208ENST00000438008 FLT3P36888 993 aa18.44■□□□□ 0.54
NCSTN-208ENST00000438008 PBX1P40424 430 aa18.44■□□□□ 0.54
NCSTN-208ENST00000438008 NSFP46459 744 aaKnown RBP18.44■□□□□ 0.54
NCSTN-208ENST00000438008 SULT1E1P49888 294 aa18.44■□□□□ 0.54
NCSTN-208ENST00000438008 UBASH3AP57075 661 aa18.44■□□□□ 0.54
NCSTN-208ENST00000438008 BRMS1LQ5PSV4 323 aa18.44■□□□□ 0.54
NCSTN-208ENST00000438008 LAIR1Q6GTX8 287 aa18.44■□□□□ 0.54
NCSTN-208ENST00000438008 PRR23BQ6ZRT6 265 aa18.44■□□□□ 0.54
NCSTN-208ENST00000438008 CEP68Q76N32 757 aa18.44■□□□□ 0.54
NCSTN-208ENST00000438008 CHSY1Q86X52 802 aa18.44■□□□□ 0.54
NCSTN-208ENST00000438008 MFN1Q8IWA4 741 aa18.44■□□□□ 0.54
NCSTN-208ENST00000438008 LGI2Q8N0V4 545 aa18.44■□□□□ 0.54
NCSTN-208ENST00000438008 AHI1Q8N157 1196 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms