RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 ZNF211Q13398 564 aaPredicted RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 OXA1LQ15070 435 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SLC15A2Q16348 729 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 PPM1LQ5SGD2 360 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 IPCEF1Q8WWN9 437 aaPredicted RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 ALG3Q92685 438 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 CDK5RAP1Q96SZ6 601 aaKnown RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 CYTH2Q99418 400 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 EYA3Q99504 573 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 WACQ9BTA9 647 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 GON7Q9BXV9 100 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 UGT1A7Q9HAW7 530 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 UGT1A10Q9HAW8 530 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 UGT1A8Q9HAW9 530 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SPC25Q9HBM1 224 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 WHRNQ9P202 907 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 FAM8A1Q9UBU6 413 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 RGS17Q9UGC6 210 aaPredicted RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 DBR1Q9UK59 544 aaKnown RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 GRID1Q9ULK0 1009 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 STRIP2Q9ULQ0 834 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 EDARQ9UNE0 448 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SNX8Q9Y5X2 465 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 PLIN4Q96Q06 1357 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 MYO3BQ8WXR4 1341 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 C16orf96A6NNT2 1141 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 JRKO75564 520 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 NR3C1P04150 777 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 PGM1P36871 562 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 RRP1BQ14684 758 aaKnown RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 ZNF772Q68DY9 489 aaPredicted RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 CCDC137Q6PK04 289 aaKnown RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 ADAT2Q7Z6V5 191 aaKnown RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 MRPL10Q7Z7H8 261 aaKnown RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 GLYCTKQ8IVS8 523 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 FAM109AQ8N4B1 249 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 LRRC71Q8N4P6 559 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 SLCO2A1Q92959 643 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 COG8Q96MW5 612 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 TTC25Q96NG3 672 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 OPALINQ96PE5 141 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 ZSWIM1Q9BR11 485 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 TMEM79Q9BSE2 394 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 ACTL7BQ9Y614 415 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 ASTN1O14525 1302 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 WDR91A4D1P6 747 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 WTIPA6NIX2 430 aaPredicted RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 H3BRJ5 948 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 DENRO43583 198 aaKnown RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 AKAP3O75969 853 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 IFNA16P05015 189 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 ICAM2P13598 275 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 RFX1P22670 979 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 CALCOCO2Q13137 446 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 LRRC14Q15048 493 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 PLA2G4EQ3MJ16 856 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 ARSHQ5FYA8 562 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 TTC27Q6P3X3 843 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 FAM124AQ86V42 546 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 STX12Q86Y82 276 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 FBXL6Q8N531 539 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 SLC44A5Q8NCS7 719 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 HDAC2Q92769 488 aaKnown RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 NELL1Q92832 810 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 ARHGEF26Q96DR7 871 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 NSL1Q96IY1 281 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 LBHD1Q9BQE6 289 aaPredicted RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 ZSCAN5AQ9BUG6 496 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 CDC42EP4Q9H3Q1 356 aaKnown RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 VAT1LQ9HCJ6 419 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 KCNK9Q9NPC2 374 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 TXNDC16Q9P2K2 825 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 LGALS13Q9UHV8 139 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 QSER1Q2KHR3 1735 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 LRRIQ4A6NIV6 560 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 ASNA1O43681 348 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 DNAJB5O75953 348 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 APBA3O96018 575 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 ASS1P00966 412 aaKnown RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 ABCB4P21439 1286 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 TNFAIP3P21580 790 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 DNAJB2P25686 324 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 COILP38432 576 aaPredicted RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 MLLT3P42568 568 aaPredicted RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 MYL6P60660 151 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 IL9RQ01113 521 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 CACNB1Q02641 598 aaPredicted RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 DLG1Q12959 904 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 TAF1CQ15572 869 aaPredicted RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 AARS2Q5JTZ9 985 aaKnown RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 UBAP2Q5T6F2 1119 aaKnown RBP7.53□□□□□ -1.2
GARNL3-205ENST00000435213 CGB2Q6NT52 195 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 ARHGAP36Q6ZRI8 547 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 ILDR2Q71H61 639 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 TTC7BQ86TV6 843 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 CDH26Q8IXH8 852 aa7.53□□□□□ -1.2
GARNL3-205ENST00000435213 ARL5BQ96KC2 179 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms