RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 IGFBPL1Q8WX77 278 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 FAR2Q96K12 515 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 MYD88Q99836 296 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 ELOVL1Q9BW60 279 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 EBF3Q9H4W6 596 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 PRDM16Q9HAZ2 1276 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 PHTF1Q9UMS5 762 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 DTNAQ9Y4J8 743 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 PCDHGB2Q9Y5G2 931 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 ZNF335Q9H4Z2 1342 aaPredicted RBP3.85□□□□□ -1.79
CLK1-204ENST00000432425 UGDHO60701 494 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 EIF5BO60841 1220 aaKnown RBP3.85□□□□□ -1.79
CLK1-204ENST00000432425 OAZ2O95190 189 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 GLP2RO95838 553 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 ITGA5P08648 1049 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 IL6STP40189 918 aaPredicted RBP3.85□□□□□ -1.79
CLK1-204ENST00000432425 SOX2P48431 317 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 HSPA7P48741 367 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 DMWDQ09019 674 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 MPEG1Q2M385 716 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 MANEAQ5SRI9 462 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 LIPMQ5VYY2 423 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 IL31Q6EBC2 164 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 MSANTD2Q6P1R3 559 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 C16orf89Q6UX73 402 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 RHPN2Q8IUC4 686 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 SLC44A5Q8NCS7 719 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 NLRP4Q96MN2 994 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 HTATIP2Q9BUP3 242 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 GATA5Q9BWX5 397 aaPredicted RBP3.85□□□□□ -1.79
CLK1-204ENST00000432425 ERVK-5Q9HDB9 667 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 PCDHB7Q9Y5E2 793 aa3.85□□□□□ -1.79
CLK1-204ENST00000432425 CD8B2A6NJW9 211 aa3.84□□□□□ -1.79
CLK1-204ENST00000432425 B4DGG1 531 aa3.84□□□□□ -1.79
CLK1-204ENST00000432425 M0QZQ0 153 aa3.84□□□□□ -1.79
CLK1-204ENST00000432425 TRIM38O00635 465 aa3.84□□□□□ -1.79
CLK1-204ENST00000432425 SYF2O95926 243 aaKnown RBP3.84□□□□□ -1.79
CLK1-204ENST00000432425 RAB30Q15771 203 aa3.84□□□□□ -1.79
CLK1-204ENST00000432425 LEXMQ3ZCV2 418 aa3.84□□□□□ -1.79
CLK1-204ENST00000432425 SRFBP1Q8NEF9 429 aaKnown RBP3.84□□□□□ -1.79
CLK1-204ENST00000432425 SLC22A17Q8WUG5 538 aa3.84□□□□□ -1.79
CLK1-204ENST00000432425 GPR78Q96P69 363 aa3.84□□□□□ -1.79
CLK1-204ENST00000432425 ABHD14AQ9BUJ0 271 aa3.84□□□□□ -1.79
CLK1-204ENST00000432425 FAM234AQ9H0X4 552 aa3.84□□□□□ -1.79
CLK1-204ENST00000432425 EPS8L2Q9H6S3 715 aa3.84□□□□□ -1.79
CLK1-204ENST00000432425 SEMA4BQ9NPR2 832 aaPredicted RBP3.84□□□□□ -1.79
CLK1-204ENST00000432425 FSCN3Q9NQT6 498 aa3.84□□□□□ -1.79
CLK1-204ENST00000432425 SLC39A10Q9ULF5 831 aa3.84□□□□□ -1.79
CLK1-204ENST00000432425 SLC8A2Q9UPR5 921 aa3.84□□□□□ -1.79
CLK1-204ENST00000432425 IGLV5-39A0A0G2JS06 123 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 GXYLT2A0PJZ3 443 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 DPPA5A6NC42 116 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 KRTAP29-1A8MX34 341 aaPredicted RBP3.84□□□□□ -1.8
CLK1-204ENST00000432425 PRPF4O43172 522 aaKnown RBP eCLIP3.84□□□□□ -1.8
CLK1-204ENST00000432425 DHHO43323 396 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 ZC3H11AO75152 810 aaKnown RBP eCLIP3.84□□□□□ -1.81e-16■■■□□ 18.6
CLK1-204ENST00000432425 SGPL1O95470 568 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 CRYABP02511 175 aaKnown RBP3.84□□□□□ -1.8
CLK1-204ENST00000432425 ALDH7A1P49419 539 aaKnown RBP3.84□□□□□ -1.8
CLK1-204ENST00000432425 NEK3P51956 506 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 ALDH18A1P54886 795 aaKnown RBP3.84□□□□□ -1.8
CLK1-204ENST00000432425 WDR93Q6P2C0 686 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 ZNF517Q6ZMY9 492 aaPredicted RBP3.84□□□□□ -1.8
CLK1-204ENST00000432425 FAM47BQ8NA70 645 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 IPO4Q8TEX9 1081 aaKnown RBP3.84□□□□□ -1.8
CLK1-204ENST00000432425 WDR60Q8WVS4 1066 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 ZFPM2Q8WW38 1151 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 NPIPB3Q92617 1050 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 MUL1Q969V5 352 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 KIAA1191Q96A73 305 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 PAAF1Q9BRP4 392 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 STK33Q9BYT3 514 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 ARNT2Q9HBZ2 717 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 KCNK9Q9NPC2 374 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 DECR2Q9NUI1 292 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 COG5Q9UP83 839 aa3.84□□□□□ -1.8
CLK1-204ENST00000432425 TRBV5-3A0A0A0MS03 114 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 PCDH17O14917 1159 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 TLX3O43711 291 aaPredicted RBP3.83□□□□□ -1.8
CLK1-204ENST00000432425 TAF5LO75529 589 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 NTSR2O95665 410 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 ANXA6P08133 673 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 LINC00205P59089 165 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 DLGAP5Q15398 846 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 MIDNQ504T8 468 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 LCE1AQ5T7P2 110 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 DAB2IPQ5VWQ8 1189 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 ANKRD40Q6AI12 368 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 CCSAPQ6IQ19 270 aaPredicted RBP3.83□□□□□ -1.8
CLK1-204ENST00000432425 BHLHA9Q7RTU4 235 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 SRLQ86TD4 932 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 ZDHHC17Q8IUH5 632 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 SAMD14Q8IZD0 417 aaPredicted RBP3.83□□□□□ -1.8
CLK1-204ENST00000432425 ARL14EPQ8N8R7 260 aaPredicted RBP3.83□□□□□ -1.8
CLK1-204ENST00000432425 ADPRHL1Q8NDY3 354 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 ACRBPQ8NEB7 543 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 DEPTORQ8TB45 409 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 SLC25A28Q96A46 364 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 PIMREGQ9BSJ6 248 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 ZBTB40Q9NUA8 1239 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms