RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 GALEQ14376 348 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 MYBPC3Q14896 1274 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 FASTKD3Q14CZ7 662 aaKnown RBP8.32□□□□□ -1.08
VTI1A-202ENST00000432306 USP41Q3LFD5 358 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 MFSD14BQ5SR56 506 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 ARMC4Q5T2S8 1044 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 NBPF12Q5TAG4 269 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-202ENST00000432306 RASIP1Q5U651 963 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 RETSATQ6NUM9 610 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 BORAQ6PGQ7 559 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 IZUMO2Q6UXV1 221 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 UNC5DQ6UXZ4 953 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 SPOCD1Q6ZMY3 1216 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 C15orf39Q6ZRI6 1047 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 LHFPL2Q6ZUX7 228 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 PHLDB2Q86SQ0 1253 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 LRRC6Q86X45 466 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 TMEM126BQ8IUX1 230 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 SCUBE1Q8IWY4 988 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 SCYL3Q8IZE3 742 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 SYCP3Q8IZU3 236 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 FBXL13Q8NEE6 735 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 SLC35B2Q8TB61 432 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 FAM172AQ8WUF8 416 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 NAT14Q8WUY8 206 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 JADE3Q92613 823 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 SEMA4DQ92854 862 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 MFSD14AQ96MC6 490 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 PAFAH2Q99487 392 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 SLX1AQ9BQ83 275 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 TRIM8Q9BZR9 551 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 PNPLA8Q9NP80 782 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 DDX4Q9NQI0 724 aaKnown RBP8.32□□□□□ -1.08
VTI1A-202ENST00000432306 NDE1Q9NXR1 346 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 WRAP73Q9P2S5 460 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-202ENST00000432306 CHORDC1Q9UHD1 332 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-202ENST00000432306 SLC7A8Q9UHI5 535 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 WASF2Q9Y6W5 498 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 LOXHD1Q8IVV2 1947 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 BRCA2P51587 3418 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 MGAMO43451 1857 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 IQANK1A0A1B0GTG1 560 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 POC1B-GALNT4F8VUJ3 575 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 CCNT2O60583 730 aaKnown RBP8.32□□□□□ -1.08
VTI1A-202ENST00000432306 TMCC1O94876 653 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 ASLP04424 464 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 BMP3P12645 472 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 UQCRBP14927 111 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 AOC1P19801 751 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 AMPD1P23109 780 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 CCNFP41002 786 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 ARL4CP56559 192 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 SESN3P58005 492 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 MAP7Q14244 749 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 CBX2Q14781 532 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-202ENST00000432306 PSMD6Q15008 389 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 CERKLQ49MI3 558 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-202ENST00000432306 HSF5Q4G112 596 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-202ENST00000432306 SLFN13Q68D06 897 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 PLA2G4FQ68DD2 849 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 NSMFQ6X4W1 530 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 RIPOR1Q6ZS17 1223 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 USP37Q86T82 979 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 KSR1Q8IVT5 923 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 ULK2Q8IYT8 1036 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 PPM1KQ8N3J5 372 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 NAT8LQ8N9F0 302 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 RBM15BQ8NDT2 890 aaKnown RBP8.32□□□□□ -1.08
VTI1A-202ENST00000432306 OR6Y1Q8NGX8 325 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 BRI3BPQ8WY22 251 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 TEKT1Q969V4 418 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 DGCR14Q96DF8 476 aaKnown RBP8.32□□□□□ -1.08
VTI1A-202ENST00000432306 CLIP3Q96DZ5 547 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 HIC2Q96JB3 615 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 SLITRK1Q96PX8 696 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 PANX3Q96QZ0 392 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 CBWD1Q9BRT8 395 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 CCDC106Q9BWC9 280 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 NMUR2Q9GZQ4 415 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 RAB20Q9NX57 234 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 HOXC10Q9NYD6 342 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 SCHIP1Q9P0W5 487 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-202ENST00000432306 CNTN6Q9UQ52 1028 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 A0A0G2JND7 137 aa8.31□□□□□ -1.08
VTI1A-202ENST00000432306 CLRN2A0PK11 232 aa8.31□□□□□ -1.08
VTI1A-202ENST00000432306 SYNDIG1LA6NDD5 238 aa8.31□□□□□ -1.08
VTI1A-202ENST00000432306 RNASEH1O60930 286 aaKnown RBP8.31□□□□□ -1.08
VTI1A-202ENST00000432306 CIB2O75838 187 aa8.31□□□□□ -1.08
VTI1A-202ENST00000432306 FBXO21O94952 628 aa8.31□□□□□ -1.08
VTI1A-202ENST00000432306 HLA-DOAP06340 250 aa8.31□□□□□ -1.08
VTI1A-202ENST00000432306 ADRB2P07550 413 aa8.31□□□□□ -1.08
VTI1A-202ENST00000432306 GJB1P08034 283 aa8.31□□□□□ -1.08
VTI1A-202ENST00000432306 SERPINA6P08185 405 aa8.31□□□□□ -1.08
VTI1A-202ENST00000432306 MYL2P10916 166 aa8.31□□□□□ -1.08
VTI1A-202ENST00000432306 VAV1P15498 845 aa8.31□□□□□ -1.08
VTI1A-202ENST00000432306 GLRA2P23416 452 aa8.31□□□□□ -1.08
VTI1A-202ENST00000432306 HOXD10P28358 340 aa8.31□□□□□ -1.08
VTI1A-202ENST00000432306 CPOXP36551 454 aa8.31□□□□□ -1.08
VTI1A-202ENST00000432306 ARSEP51690 589 aa8.31□□□□□ -1.08
VTI1A-202ENST00000432306 TAS2R40P59535 323 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms