RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 RIMKLBQ9ULI2 386 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 RIPOR2Q9Y4F9 1068 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 PCDHB7Q9Y5E2 793 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 LY6G6EA0A0G2JKS1 128 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 MBD3L5A6NJ08 208 aaPredicted RBP2.45□□□□□ -2.02
CDC40-204ENST00000431461 PRSS44E7EML9 344 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 CES2O00748 559 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 ADAM10O14672 748 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 NPC1O15118 1278 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 HNRNPRO43390 633 aaKnown RBP2.45□□□□□ -2.02
CDC40-204ENST00000431461 NDST3O95803 873 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 FGAP02671 866 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 ANXA6P08133 673 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 PDHA1P08559 390 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 ARP10275 920 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 HGFP14210 728 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 ADORA2AP29274 412 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 SERPINB3P29508 390 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 IL6STP40189 918 aaPredicted RBP2.45□□□□□ -2.02
CDC40-204ENST00000431461 THBS3P49746 956 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 PAPOLAP51003 745 aaKnown RBP2.45□□□□□ -2.02
CDC40-204ENST00000431461 CLCN2P51788 898 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 ITGA8P53708 1063 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 ARL4CP56559 192 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 AP2B1P63010 937 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 E2F1Q01094 437 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 TLE3Q04726 772 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 SEMA3BQ13214 749 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 DNASE1L3Q13609 305 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 DHX8Q14562 1220 aaKnown RBP2.45□□□□□ -2.02
CDC40-204ENST00000431461 KCNAB1Q14722 419 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 ELF2Q15723 593 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 PTCHD3Q3KNS1 767 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 C10orf62Q5T681 223 aaPredicted RBP2.45□□□□□ -2.02
CDC40-204ENST00000431461 ANKRD45Q5TZF3 282 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 MEX3CQ5U5Q3 659 aaKnown RBP2.45□□□□□ -2.02
CDC40-204ENST00000431461 ANO1Q5XXA6 986 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 CCDC144NLQ6NUI1 221 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 CLEC9AQ6UXN8 241 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 GSG1LQ6UXU4 331 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 NAPRTQ6XQN6 538 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 USP49Q70CQ1 688 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 TRABD2AQ86V40 505 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 EXOC8Q8IYI6 725 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 CPXCR1Q8N123 301 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 C12orf76Q8N812 135 aaPredicted RBP2.45□□□□□ -2.02
CDC40-204ENST00000431461 TERB1Q8NA31 727 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 USP38Q8NB14 1042 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 SRFBP1Q8NEF9 429 aaKnown RBP2.45□□□□□ -2.02
CDC40-204ENST00000431461 VPS37AQ8NEZ2 397 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 OR52L2PQ8NGH6 319 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 THAP4Q8WY91 577 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 CCDC17Q96LX7 622 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 HS6ST2Q96MM7 605 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 FAM118BQ9BPY3 351 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 THAP7Q9BT49 309 aaPredicted RBP2.45□□□□□ -2.02
CDC40-204ENST00000431461 RASSF1Q9NS23 344 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 TXLNGQ9NUQ3 528 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 BAG5Q9UL15 447 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 SUFUQ9UMX1 484 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 C19orf53Q9UNZ5 99 aaPredicted RBP2.45□□□□□ -2.02
CDC40-204ENST00000431461 ZBTB1Q9Y2K1 713 aa2.45□□□□□ -2.02
CDC40-204ENST00000431461 SIRT4Q9Y6E7 314 aaPredicted RBP2.45□□□□□ -2.02
CDC40-204ENST00000431461 SPATA31A5Q5VU36 1347 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 SPATA31A7Q8IWB4 1347 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 ZNF335Q9H4Z2 1342 aaPredicted RBP2.44□□□□□ -2.02
CDC40-204ENST00000431461 A0A087WZ62 844 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 CCDC196A0A1B0GTZ2 297 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 FAM90A8PA6NJQ4 464 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 CD8B2A6NJW9 211 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 SAC3D1A6NKF1 404 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 TMEM232C9JQI7 657 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 GTPBP1O00178 669 aaKnown RBP2.44□□□□□ -2.02
CDC40-204ENST00000431461 GCATO75600 419 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 ACTL6BO94805 426 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 SGPL1O95470 568 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 MT-CO3P00414 261 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 TFRCP02786 760 aaKnown RBP2.44□□□□□ -2.02
CDC40-204ENST00000431461 FAM90A13PP0C7W8 464 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 FAM90A24PP0C7X0 464 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 TMIGD3P0DMS9 266 aaPredicted RBP2.44□□□□□ -2.02
CDC40-204ENST00000431461 PECAM1P16284 738 aaPredicted RBP2.44□□□□□ -2.02
CDC40-204ENST00000431461 ENGP17813 658 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 CST5P28325 142 aaPredicted RBP2.44□□□□□ -2.02
CDC40-204ENST00000431461 IGHMBP2P38935 993 aaKnown RBP2.44□□□□□ -2.02
CDC40-204ENST00000431461 PCP4P48539 62 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 PPM1FP49593 454 aaPredicted RBP2.44□□□□□ -2.02
CDC40-204ENST00000431461 JAK3P52333 1124 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 NANOS2P60321 138 aaKnown RBP2.44□□□□□ -2.02
CDC40-204ENST00000431461 HSF1Q00613 529 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 PPFIA1Q13136 1202 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 BIRC3Q13489 604 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 ERV3-1Q14264 604 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 SEMA3AQ14563 771 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 RBMS2Q15434 407 aaKnown RBP2.44□□□□□ -2.02
CDC40-204ENST00000431461 CYP1B1Q16678 543 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 P3H1Q32P28 736 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 LEXMQ3ZCV2 418 aa2.44□□□□□ -2.02
CDC40-204ENST00000431461 AASDHQ4L235 1098 aaPredicted RBP2.44□□□□□ -2.02
CDC40-204ENST00000431461 TMTC4Q5T4D3 741 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms