RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TMEM8AQ9HCN3 771 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 ANKMY1Q9P2S6 941 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 XIRP1Q702N8 1843 aaKnown RBP16.52■□□□□ 0.23
C9orf3-206ENST00000428313 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.52■□□□□ 0.23
C9orf3-206ENST00000428313 NOP56O00567 594 aaKnown RBP16.52■□□□□ 0.23
C9orf3-206ENST00000428313 ACOT8O14734 319 aa16.52■□□□□ 0.23
C9orf3-206ENST00000428313 RGS13O14921 159 aa16.52■□□□□ 0.23
C9orf3-206ENST00000428313 LDHBP07195 334 aaKnown RBP16.52■□□□□ 0.23
C9orf3-206ENST00000428313 MAPTP10636 758 aaKnown RBP16.52■□□□□ 0.23
C9orf3-206ENST00000428313 HSPA8P11142 646 aaKnown RBP16.52■□□□□ 0.23
C9orf3-206ENST00000428313 P4HA1P13674 534 aa16.52■□□□□ 0.23
C9orf3-206ENST00000428313 RCVRNP35243 200 aa16.52■□□□□ 0.23
C9orf3-206ENST00000428313 PSMC5P62195 406 aa16.52■□□□□ 0.23
C9orf3-206ENST00000428313 NFATC3Q12968 1075 aa16.52■□□□□ 0.23
C9orf3-206ENST00000428313 CEACAM7Q14002 265 aa16.52■□□□□ 0.23
C9orf3-206ENST00000428313 SF3B4Q15427 424 aaKnown RBP eCLIP16.52■□□□□ 0.232e-8■■□□□ 13.7
C9orf3-206ENST00000428313 GPR107Q5VW38 600 aa16.52■□□□□ 0.23
C9orf3-206ENST00000428313 PHF13Q86YI8 300 aaPredicted RBP16.52■□□□□ 0.23
C9orf3-206ENST00000428313 LRRC47Q8N1G4 583 aaKnown RBP16.52■□□□□ 0.23
C9orf3-206ENST00000428313 CPSF7Q8N684 471 aaKnown RBP16.52■□□□□ 0.23
C9orf3-206ENST00000428313 ACCSQ96QU6 501 aa16.52■□□□□ 0.23
C9orf3-206ENST00000428313 TUBA1CQ9BQE3 449 aa16.52■□□□□ 0.23
C9orf3-206ENST00000428313 CBWD1Q9BRT8 395 aa16.52■□□□□ 0.23
C9orf3-206ENST00000428313 SIAEQ9HAT2 523 aa16.52■□□□□ 0.23
C9orf3-206ENST00000428313 PNPOQ9NVS9 261 aa16.52■□□□□ 0.23
C9orf3-206ENST00000428313 PACSIN3Q9UKS6 424 aa16.52■□□□□ 0.23
C9orf3-206ENST00000428313 CROCCQ5TZA2 2017 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 RGSL1A5PLK6 1076 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 K7ENM7 598 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 AIM2O14862 343 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 SLC22A2O15244 555 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 SERPINB9P50453 376 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 RAB39AQ14964 217 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 NHSL2Q5HYW2 709 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 WDR78Q5VTH9 848 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 ADGRF2Q8IZF7 708 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 FAM47BQ8NA70 645 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 FBXL13Q8NEE6 735 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 RP9Q8TA86 221 aaKnown RBP16.51■□□□□ 0.23
C9orf3-206ENST00000428313 LENG8Q96PV6 779 aaPredicted RBP16.51■□□□□ 0.23
C9orf3-206ENST00000428313 C11orf70Q9BRQ4 267 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 SLC4A5Q9BY07 1137 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 IVNS1ABPQ9Y6Y0 642 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 FOCADQ5VW36 1801 aa16.51■□□□□ 0.23
C9orf3-206ENST00000428313 USP17L10C9JJH3 530 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 FAM86B1E9PN63 330 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 CLPXO76031 633 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 FAM86B2P0C5J1 330 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 YBX3P16989 372 aaKnown RBP eCLIP16.5■□□□□ 0.233e-7■■□□□ 11.8
C9orf3-206ENST00000428313 HARS2P49590 506 aaKnown RBP16.5■□□□□ 0.23
C9orf3-206ENST00000428313 OTUD4Q01804 1114 aaKnown RBP16.5■□□□□ 0.23
C9orf3-206ENST00000428313 C1QBPQ07021 282 aaKnown RBP16.5■□□□□ 0.23
C9orf3-206ENST00000428313 PMS2P3Q13401 168 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 RFTN1Q14699 578 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-206ENST00000428313 Q3C1V9 767 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 GALNT18Q6P9A2 607 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 MYO1HQ8N1T3 1032 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 ACTL9Q8TC94 416 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 TFAP2CQ92754 450 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 ZNF347Q96SE7 839 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 CEP44Q9C0F1 390 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 MOV10Q9HCE1 1003 aaKnown RBP16.5■□□□□ 0.23
C9orf3-206ENST00000428313 PARVAQ9NVD7 372 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 TAF1P21675 1872 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 CXorf49A8MYA2 514 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-206ENST00000428313 MEIS2O14770 477 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 FARP2O94887 1054 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-206ENST00000428313 LDHCP07864 332 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 MYF6P23409 242 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 SREBF1P36956 1147 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 BASP1P80723 227 aaKnown RBP16.5■□□□□ 0.23
C9orf3-206ENST00000428313 MTM1Q13496 603 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 BMPR2Q13873 1038 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 DGKDQ16760 1214 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 TIGD2Q4W5G0 525 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 C2CD6Q53TS8 623 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 FAM47CQ5HY64 1035 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 TTC33Q6PID6 262 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-206ENST00000428313 EPGNQ6UW88 154 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 TMEM26Q6ZUK4 368 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 KRT27Q7Z3Y8 459 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 C11orf74Q86VG3 221 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 IFNLR1Q8IU57 520 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-206ENST00000428313 LILRB4Q8NHJ6 448 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 CALML6Q8TD86 181 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 TMC2Q8TDI7 906 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 CFAP36Q96G28 342 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 UHRF1Q96T88 793 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-206ENST00000428313 VRTNQ9H8Y1 702 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 SACM1LQ9NTJ5 587 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 VPS51Q9UID3 782 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 TANC1Q9C0D5 1861 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 SLX4Q8IY92 1834 aa16.5■□□□□ 0.23
C9orf3-206ENST00000428313 IGKV6D-41A0A0C4DH26 115 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 ZNF839A8K0R7 811 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 PLOD2O00469 737 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 AKAP10O43572 662 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 KLHL41O60662 606 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 ZC3H11AO75152 810 aaKnown RBP eCLIP16.49■□□□□ 0.23
C9orf3-206ENST00000428313 TCF4P15884 667 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms