RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 CDR2Q01850 454 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 NME3Q13232 169 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 ZSCAN23Q3MJ62 389 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 RAP1GAP2Q684P5 730 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 TMEM215Q68D42 235 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 NUDT18Q6ZVK8 323 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 KBTBD6Q86V97 674 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 CFAP52Q8N1V2 620 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 MDGA1Q8NFP4 955 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 SLC30A5Q8TAD4 765 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 HMGB4Q8WW32 186 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 GAB3Q8WWW8 586 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 PCDHB18PQ96TA0 734 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 ASNSD1Q9NWL6 643 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 DDIT4Q9NX09 232 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 CALCOCO1Q9P1Z2 691 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 RAB23Q9ULC3 237 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 STARD13Q9Y3M8 1113 aa15.44■□□□□ 0.06
RTN4-210ENST00000427710 GJB6O95452 261 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 APOEP02649 317 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 GLI1P08151 1106 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 HOXB2P14652 356 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 NTSR1P30989 418 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 GGCXP38435 758 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 GABRB2P47870 512 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 NNTQ13423 1086 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 EIF4EBP2Q13542 120 aaPredicted RBP15.43■□□□□ 0.06
RTN4-210ENST00000427710 FAM102AQ5T9C2 384 aaPredicted RBP15.43■□□□□ 0.06
RTN4-210ENST00000427710 OTUD1Q5VV17 481 aaPredicted RBP15.43■□□□□ 0.06
RTN4-210ENST00000427710 SMYD5Q6GMV2 418 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 TRNP1Q6NT89 227 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 KIAA1211LQ6NV74 962 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 SLC26A9Q7LBE3 791 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 CACNA2D4Q7Z3S7 1137 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 ANKS1BQ7Z6G8 1248 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 KIAA2013Q8IYS2 634 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 CHPFQ8IZ52 775 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 LGI2Q8N0V4 545 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 PGBD3Q8N328 593 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 FAM160A2Q8N612 972 aaPredicted RBP15.43■□□□□ 0.06
RTN4-210ENST00000427710 RLN3Q8WXF3 142 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 RNF34Q969K3 372 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 TRIM62Q9BVG3 475 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 CIPCQ9C0C6 399 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 SLC6A17Q9H1V8 727 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 ABCB8Q9NUT2 735 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 BCCIPQ9P287 314 aaKnown RBP eCLIP15.43■□□□□ 0.06
RTN4-210ENST00000427710 SLC27A6Q9Y2P4 619 aa15.43■□□□□ 0.06
RTN4-210ENST00000427710 MUC22E2RYF6 1773 aaPredicted RBP15.42■□□□□ 0.06
RTN4-210ENST00000427710 M0QYT0 321 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 LSM8O95777 96 aaKnown RBP15.42■□□□□ 0.06
RTN4-210ENST00000427710 CYP1A1P04798 512 aaPredicted RBP15.42■□□□□ 0.06
RTN4-210ENST00000427710 TACR2P21452 398 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 HLA-FP30511 346 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 CD70P32970 193 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 CNR2P34972 360 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 IL12RB1P42701 662 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 NUMBP49757 651 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 SULT1E1P49888 294 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 ATXN1P54253 815 aaKnown RBP15.42■□□□□ 0.06
RTN4-210ENST00000427710 SNX16P57768 344 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 HSF5Q4G112 596 aaPredicted RBP15.42■□□□□ 0.06
RTN4-210ENST00000427710 FILIP1LQ4L180 1135 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 MS4A13Q5J8X5 152 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 MMS22LQ6ZRQ5 1243 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 CHST9Q7L1S5 443 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.42■□□□□ 0.06
RTN4-210ENST00000427710 RASSF3Q86WH2 238 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 CHSY1Q86X52 802 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 CIR1Q86X95 450 aaPredicted RBP15.42■□□□□ 0.06
RTN4-210ENST00000427710 ZNF677Q86XU0 584 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 CARNMT1Q8N4J0 409 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 FRMD1Q8N878 549 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 ATP6V0D2Q8N8Y2 350 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 ZNF397Q8NF99 534 aaPredicted RBP15.42■□□□□ 0.06
RTN4-210ENST00000427710 CYB5D2Q8WUJ1 264 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 RUBCNQ92622 972 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 AZIN2Q96A70 460 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 C11orf70Q9BRQ4 267 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 POLMQ9NP87 494 aaPredicted RBP15.42■□□□□ 0.06
RTN4-210ENST00000427710 SEPT11Q9NVA2 429 aaKnown RBP15.42■□□□□ 0.06
RTN4-210ENST00000427710 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.42■□□□□ 0.06
RTN4-210ENST00000427710 EBF1Q9UH73 591 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 SNX10Q9Y5X0 201 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 STON1Q9Y6Q2 735 aa15.42■□□□□ 0.06
RTN4-210ENST00000427710 TNRC6BQ9UPQ9 1833 aaKnown RBP15.42■□□□□ 0.06
RTN4-210ENST00000427710 CCDC163A0A0D9SF12 145 aa15.41■□□□□ 0.06
RTN4-210ENST00000427710 A0A1B0GTH6 734 aa15.41■□□□□ 0.06
RTN4-210ENST00000427710 A0A1W2PQF6 199 aa15.41■□□□□ 0.06
RTN4-210ENST00000427710 KCNU1A8MYU2 1149 aa15.41■□□□□ 0.06
RTN4-210ENST00000427710 ALDH1A2O94788 518 aa15.41■□□□□ 0.06
RTN4-210ENST00000427710 SERPINC1P01008 464 aa15.41■□□□□ 0.06
RTN4-210ENST00000427710 PTMSP20962 102 aa15.41■□□□□ 0.06
RTN4-210ENST00000427710 BCKDHBP21953 392 aa15.41■□□□□ 0.06
RTN4-210ENST00000427710 GBP1P32455 592 aa15.41■□□□□ 0.06
RTN4-210ENST00000427710 NOS2P35228 1153 aa15.41■□□□□ 0.06
RTN4-210ENST00000427710 FLT3P36888 993 aa15.41■□□□□ 0.06
RTN4-210ENST00000427710 MATKP42679 507 aa15.41■□□□□ 0.06
RTN4-210ENST00000427710 FANCCQ00597 558 aa15.41■□□□□ 0.06
RTN4-210ENST00000427710 CCDC6Q16204 474 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms