RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 LONRF2Q1L5Z9 754 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 RAB41Q5JT25 222 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 MAATS1Q7Z4T9 603 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 IFT20Q8IY31 132 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 SLC35F5Q8WV83 523 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 KCTD13Q8WZ19 329 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 CD101Q93033 1021 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 PNKPQ96T60 521 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 IRF2BPLQ9H1B7 796 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 EPC1Q9H2F5 836 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 KIF9Q9HAQ2 790 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 LMAN1LQ9HAT1 526 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 LRRC4Q9HBW1 653 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 GMIPQ9P107 970 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 STIM2Q9P246 746 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 CHORDC1Q9UHD1 332 aaPredicted RBP16.71■□□□□ 0.27
AFF3-208ENST00000427118 MRPS17Q9Y2R5 130 aaKnown RBP16.71■□□□□ 0.27
AFF3-208ENST00000427118 WNT6Q9Y6F9 365 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 USP3Q9Y6I4 520 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 R4GN57 208 aa16.71■□□□□ 0.27
AFF3-208ENST00000427118 CFAP54Q96N23 3096 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 TULP2O00295 520 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 SCAMP3O14828 347 aaKnown RBP16.7■□□□□ 0.26
AFF3-208ENST00000427118 PSTPIP1O43586 416 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 TNFRSF8P28908 595 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 GSCP56915 257 aaPredicted RBP16.7■□□□□ 0.26
AFF3-208ENST00000427118 MTAPQ13126 283 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 GAS6Q14393 721 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 ITPRIPL2Q3MIP1 535 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 SNX30Q5VWJ9 437 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 DENND1BQ6P3S1 775 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 DCUN1D2Q6PH85 259 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 TSSK4Q6SA08 328 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 Q6ZS52 159 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 ASCL5Q7RTU5 278 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 C3orf20Q8ND61 904 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 C1orf131Q8NDD1 294 aaKnown RBP16.7■□□□□ 0.26
AFF3-208ENST00000427118 IPO4Q8TEX9 1081 aaKnown RBP16.7■□□□□ 0.26
AFF3-208ENST00000427118 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.7■□□□□ 0.26
AFF3-208ENST00000427118 HSFY1Q96LI6 401 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 NELL2Q99435 816 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 LINC00597Q9H2U6 94 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 ACBD3Q9H3P7 528 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 SYNCQ9H7C4 482 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 C8orf33Q9H7E9 229 aaPredicted RBP16.7■□□□□ 0.26
AFF3-208ENST00000427118 TLR8Q9NR97 1041 aaKnown RBP16.7■□□□□ 0.26
AFF3-208ENST00000427118 THG1LQ9NWX6 298 aaKnown RBP16.7■□□□□ 0.26
AFF3-208ENST00000427118 SMPD4Q9NXE4 827 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 ARHGAP26Q9UNA1 814 aa16.7■□□□□ 0.26
AFF3-208ENST00000427118 FAM186AA6NE01 2351 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 LEFTY2O00292 366 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 OAS1P00973 400 aaKnown RBP16.69■□□□□ 0.26
AFF3-208ENST00000427118 FGGP02679 453 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 ZDHHC11BP0C7U3 371 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 HOXC13P31276 330 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 GPD2P43304 727 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 RPS9P46781 194 aaKnown RBP16.69■□□□□ 0.26
AFF3-208ENST00000427118 PSEN1P49768 467 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 PEX5P50542 639 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 TKTL1P51854 596 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 VSNL1P62760 191 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 RUNX3Q13761 415 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 PIGHQ14442 188 aaPredicted RBP16.69■□□□□ 0.26
AFF3-208ENST00000427118 PMF1Q6P1K2 205 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 HDXQ7Z353 690 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 RHOT1Q8IXI2 618 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 EIF1ADQ8N9N8 165 aaKnown RBP16.69■□□□□ 0.26
AFF3-208ENST00000427118 STK32AQ8WU08 396 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 C18orf8Q96DM3 657 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 KRT12Q99456 494 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 LRRC1Q9BTT6 524 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 CHRDQ9H2X0 955 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.69■□□□□ 0.26
AFF3-208ENST00000427118 C2orf42Q9NWW7 574 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 CPQQ9Y646 472 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 PTPRZ1P23471 2315 aaPredicted RBP16.69■□□□□ 0.26
AFF3-208ENST00000427118 FRYLO94915 3013 aa16.69■□□□□ 0.26
AFF3-208ENST00000427118 TMEM191CA6NGB0 347 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 PROB1E7EW31 1015 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 NCAM2O15394 837 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 LAMTOR5O43504 91 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 ZRANB2O95218 330 aaKnown RBP eCLIP16.68■□□□□ 0.26
AFF3-208ENST00000427118 OLFM2O95897 454 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 ZBED1O96006 694 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 ACADSBP45954 432 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 RGS7P49802 495 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 TUBP50607 506 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 MLLT6P55198 1093 aaPredicted RBP16.68■□□□□ 0.26
AFF3-208ENST00000427118 RNASE9P60153 205 aaKnown RBP16.68■□□□□ 0.26
AFF3-208ENST00000427118 CSTF1Q05048 431 aaKnown RBP16.68■□□□□ 0.26
AFF3-208ENST00000427118 GPS2Q13227 327 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 PM20D1Q6GTS8 502 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 CCNI2Q6ZMN8 369 aaPredicted RBP16.68■□□□□ 0.26
AFF3-208ENST00000427118 RALGPS2Q86X27 583 aaPredicted RBP16.68■□□□□ 0.26
AFF3-208ENST00000427118 SIX6OS1Q8N1H7 587 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 SCML4Q8N228 414 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 ARHGAP18Q8N392 663 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 OSCP1Q8WVF1 389 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 CCSER2Q9H7U1 834 aa16.68■□□□□ 0.26
AFF3-208ENST00000427118 FBRSL1Q9HCM7 1045 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms