RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 SGF29Q96ES7 293 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 DNAI2Q9GZS0 605 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 CNTN3Q9P232 1028 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 ARHGAP28Q9P2N2 729 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 DCDC2Q9UHG0 476 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 LTBP4Q8N2S1 1624 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 ASS1P00966 412 aaKnown RBP10.53□□□□□ -0.72
CTCFL-206ENST00000426658 HMGCRP04035 888 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 PGK2P07205 417 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 SEPT6Q14141 434 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 NOMO1Q15155 1222 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 VWA5B1Q5TIE3 1220 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 DLK2Q6UY11 383 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 SCUBE3Q8IX30 993 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 TFAP2BQ92481 460 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 EME1Q96AY2 570 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 TMA16Q96EY4 203 aaKnown RBP10.53□□□□□ -0.72
CTCFL-206ENST00000426658 CPB2Q96IY4 423 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 WNK4Q96J92 1243 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 WDR83Q9BRX9 315 aaKnown RBP10.53□□□□□ -0.72
CTCFL-206ENST00000426658 STN1Q9H668 368 aaKnown RBP10.53□□□□□ -0.72
CTCFL-206ENST00000426658 COPS7BQ9H9Q2 264 aaPredicted RBP10.53□□□□□ -0.72
CTCFL-206ENST00000426658 PHF24Q9UPV7 400 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 ZNF541Q9H0D2 1346 aa10.53□□□□□ -0.72
CTCFL-206ENST00000426658 YDJCA8MPS7 323 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 CASQ2O14958 399 aaPredicted RBP10.52□□□□□ -0.72
CTCFL-206ENST00000426658 XPO1O14980 1071 aaKnown RBP10.52□□□□□ -0.72
CTCFL-206ENST00000426658 USP12O75317 370 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 TRUB2O95900 331 aaKnown RBP10.52□□□□□ -0.72
CTCFL-206ENST00000426658 TOP3BO95985 862 aaKnown RBP10.52□□□□□ -0.72
CTCFL-206ENST00000426658 PENKP01210 267 aaPredicted RBP10.52□□□□□ -0.72
CTCFL-206ENST00000426658 COX4I1P13073 169 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 CNTFP26441 200 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 TPP2P29144 1249 aaPredicted RBP10.52□□□□□ -0.72
CTCFL-206ENST00000426658 WNT7BP56706 349 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 SNX16P57768 344 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 POU5F1BQ06416 359 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 PPIDQ08752 370 aaKnown RBP10.52□□□□□ -0.72
CTCFL-206ENST00000426658 DCTN2Q13561 401 aaKnown RBP10.52□□□□□ -0.72
CTCFL-206ENST00000426658 LY6KQ17RY6 165 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 TRMT10BQ6PF06 316 aaKnown RBP10.52□□□□□ -0.72
CTCFL-206ENST00000426658 VSIG10LQ86VR7 867 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 FAM131BQ86XD5 332 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 SEPT1Q8WYJ6 367 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 LRRC39Q96DD0 335 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 HPDLQ96IR7 371 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 OCEL1Q9H607 264 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 LRRC4Q9HBW1 653 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 XPNPEP1Q9NQW7 623 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 MAN1C1Q9NR34 630 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 LMCD1Q9NZU5 365 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 FNDC3AQ9Y2H6 1198 aaKnown RBP10.52□□□□□ -0.72
CTCFL-206ENST00000426658 AP4B1Q9Y6B7 739 aa10.52□□□□□ -0.72
CTCFL-206ENST00000426658 KPNA7A9QM74 516 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 GOLGA8TH3BQL2 631 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 TNPO2O14787 897 aaKnown RBP10.52□□□□□ -0.73
CTCFL-206ENST00000426658 ITM2AO43736 263 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 CCNT2O60583 730 aaKnown RBP10.52□□□□□ -0.73
CTCFL-206ENST00000426658 RFPL1O75677 317 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 THRAP10827 490 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 MYL4P12829 197 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 MSX2P35548 267 aaPredicted RBP10.52□□□□□ -0.73
CTCFL-206ENST00000426658 GABRB2P47870 512 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 GLRBP48167 497 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 EFNA5P52803 228 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 SLC25A11Q02978 314 aaKnown RBP10.52□□□□□ -0.73
CTCFL-206ENST00000426658 PTPN11Q06124 597 aaPredicted RBP10.52□□□□□ -0.73
CTCFL-206ENST00000426658 ITKQ08881 620 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 CCNIQ14094 377 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 WDR49Q8IV35 697 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 RYBPQ8N488 228 aaPredicted RBP10.52□□□□□ -0.73
CTCFL-206ENST00000426658 GFM2Q969S9 779 aaKnown RBP10.52□□□□□ -0.73
CTCFL-206ENST00000426658 HAPLN3Q96S86 360 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 MRPS26Q9BYN8 205 aaKnown RBP10.52□□□□□ -0.73
CTCFL-206ENST00000426658 NUF2Q9BZD4 464 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 C6orf203Q9P0P8 240 aaPredicted RBP10.52□□□□□ -0.73
CTCFL-206ENST00000426658 BTBD7Q9P203 1132 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 PSMD13Q9UNM6 376 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 TPP1O14773 563 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 BUD23O43709 281 aaKnown RBP10.52□□□□□ -0.73
CTCFL-206ENST00000426658 ESRRGP62508 458 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 MRPS5P82675 430 aaKnown RBP10.52□□□□□ -0.73
CTCFL-206ENST00000426658 KCNJ11Q14654 390 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 GOLGA7BQ2TAP0 167 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 EFCAB12Q6NXP0 572 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 BNC2Q6ZN30 1099 aaPredicted RBP10.52□□□□□ -0.73
CTCFL-206ENST00000426658 ACTRT2Q8TDY3 377 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 USP33Q8TEY7 942 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 EBNA1BP2Q99848 306 aaKnown RBP10.52□□□□□ -0.73
CTCFL-206ENST00000426658 SNX25Q9H3E2 840 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 HOXC10Q9NYD6 342 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 GTSE1Q9NYZ3 720 aa10.52□□□□□ -0.73
CTCFL-206ENST00000426658 CPA3P15088 417 aa10.51□□□□□ -0.73
CTCFL-206ENST00000426658 PHKA2P46019 1235 aa10.51□□□□□ -0.73
CTCFL-206ENST00000426658 CDK18Q07002 472 aa10.51□□□□□ -0.73
CTCFL-206ENST00000426658 HNRNPDQ14103 355 aaKnown RBP10.51□□□□□ -0.73
CTCFL-206ENST00000426658 TAF12Q16514 161 aa10.51□□□□□ -0.73
CTCFL-206ENST00000426658 SPDYE2Q495Y8 402 aa10.51□□□□□ -0.73
CTCFL-206ENST00000426658 NADK2Q4G0N4 442 aa10.51□□□□□ -0.73
CTCFL-206ENST00000426658 STYK1Q6J9G0 422 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms