RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 C11orf44Q8N8P7 122 aa6.83□□□□□ -1.32
SSBP3-207ENST00000426150 CEP70Q8NHQ1 597 aa6.83□□□□□ -1.32
SSBP3-207ENST00000426150 CPT1BQ92523 772 aa6.83□□□□□ -1.32
SSBP3-207ENST00000426150 HTRA1Q92743 480 aa6.83□□□□□ -1.32
SSBP3-207ENST00000426150 TWNKQ96RR1 684 aa6.83□□□□□ -1.32
SSBP3-207ENST00000426150 HAPLN3Q96S86 360 aa6.83□□□□□ -1.32
SSBP3-207ENST00000426150 ACTRT3Q9BYD9 372 aa6.83□□□□□ -1.32
SSBP3-207ENST00000426150 TPSD1Q9BZJ3 242 aa6.83□□□□□ -1.32
SSBP3-207ENST00000426150 ZNF768Q9H5H4 540 aaKnown RBP6.83□□□□□ -1.32
SSBP3-207ENST00000426150 AKIP1Q9NQ31 210 aa6.83□□□□□ -1.32
SSBP3-207ENST00000426150 TMEM74BQ9NUR3 256 aa6.83□□□□□ -1.32
SSBP3-207ENST00000426150 TMEM160Q9NX00 188 aa6.83□□□□□ -1.32
SSBP3-207ENST00000426150 NDUFAF4Q9P032 175 aa6.83□□□□□ -1.32
SSBP3-207ENST00000426150 JAG2Q9Y219 1238 aa6.83□□□□□ -1.32
SSBP3-207ENST00000426150 PKD1L3Q7Z443 1732 aa6.83□□□□□ -1.32
SSBP3-207ENST00000426150 NSD3Q9BZ95 1437 aa6.83□□□□□ -1.32
SSBP3-207ENST00000426150 TTC21AQ8NDW8 1320 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 KIAA1210Q9ULL0 1709 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 GLTPD2A6NH11 291 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 KIF28PB7ZC32 967 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 PPM1DO15297 605 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 CENPBP07199 599 aaPredicted RBP6.82□□□□□ -1.32
SSBP3-207ENST00000426150 SERPINA4P29622 427 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 RXRGP48443 463 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 ATXN1P54253 815 aaKnown RBP6.82□□□□□ -1.32
SSBP3-207ENST00000426150 VAMP2P63027 116 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 FOXD4Q12950 439 aaPredicted RBP6.82□□□□□ -1.32
SSBP3-207ENST00000426150 ACOX1Q15067 660 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 SMAD1Q15797 465 aaKnown RBP6.82□□□□□ -1.32
SSBP3-207ENST00000426150 GALNTL6Q49A17 601 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 HS1BP3Q53T59 392 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 FAAH2Q6GMR7 532 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 FAM180BQ6P0A1 224 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 MSANTD2Q6P1R3 559 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 C1orf122Q6ZSJ8 110 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 TRABD2AQ86V40 505 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 METTL25Q8N6Q8 603 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 PCYOX1LQ8NBM8 494 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 EDAQ92838 391 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 WWC2-AS2Q96NR7 200 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 CHODLQ9H9P2 273 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 SMC4Q9NTJ3 1288 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 KCND3Q9UK17 655 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 NFU1Q9UMS0 254 aa6.82□□□□□ -1.32
SSBP3-207ENST00000426150 DRG1Q9Y295 367 aaKnown RBP6.82□□□□□ -1.32
SSBP3-207ENST00000426150 CENPJQ9HC77 1338 aaPredicted RBP6.81□□□□□ -1.32
SSBP3-207ENST00000426150 USP54Q70EL1 1684 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 QRICH2Q9H0J4 1663 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 TRGV11A0A075B6L2 103 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 VNN1O95497 513 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 ERBB2P04626 1255 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 PDHA1P08559 390 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 KRT9P35527 623 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 CDK7P50613 346 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 TMF1P82094 1093 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 CHRNDQ07001 517 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 RESTQ13127 1097 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 MAPK7Q13164 816 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 TOB2Q14106 344 aaPredicted RBP6.81□□□□□ -1.32
SSBP3-207ENST00000426150 ICAM4Q14773 271 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 BEAN1Q3B7T3 259 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 TMEM196Q5HYL7 178 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 MAP3K21Q5TCX8 1036 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 PIK3AP1Q6ZUJ8 805 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 SYNE4Q8N205 404 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 HMGB4Q8WW32 186 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 TMX4Q9H1E5 349 aaPredicted RBP6.81□□□□□ -1.32
SSBP3-207ENST00000426150 PI4KBQ9UBF8 816 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 STEAP1Q9UHE8 339 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 SCINQ9Y6U3 715 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 C4BP0C0L5 1744 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 CNTNAP1P78357 1384 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 NFAT5O94916 1531 aa6.81□□□□□ -1.32
SSBP3-207ENST00000426150 TAF1LQ8IZX4 1826 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 CDKL5O76039 1030 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 WDR47O94967 919 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 HSPA8P11142 646 aaKnown RBP6.8□□□□□ -1.32
SSBP3-207ENST00000426150 ATP1A3P13637 1013 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 PPP3CBP16298 524 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 PBX1P40424 430 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 MAGEA10P43363 369 aaPredicted RBP6.8□□□□□ -1.32
SSBP3-207ENST00000426150 SF3A3Q12874 501 aaKnown RBP eCLIP6.8□□□□□ -1.326e-12■■■■■ 79.1
SSBP3-207ENST00000426150 MTAPQ13126 283 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 P3H1Q32P28 736 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 ARMC6Q6NXE6 501 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 RINLQ6ZS11 566 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 BBS12Q6ZW61 710 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 SYT13Q7L8C5 426 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 DTX2Q86UW9 622 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 SIAH1Q8IUQ4 282 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 SUPT20HQ8NEM7 779 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 GLG1Q92896 1179 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 MCRS1Q96EZ8 462 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 ADOQ96SZ5 270 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 MECRQ9BV79 373 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 DERAQ9Y315 318 aa6.8□□□□□ -1.32
SSBP3-207ENST00000426150 RRP7AQ9Y3A4 280 aaKnown RBP6.8□□□□□ -1.32
SSBP3-207ENST00000426150 TNRC18O15417 2968 aaPredicted RBP6.8□□□□□ -1.32
SSBP3-207ENST00000426150 KTN1Q86UP2 1357 aaKnown RBP6.8□□□□□ -1.32
SSBP3-207ENST00000426150 UBR3Q6ZT12 1888 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms