RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 SULT1E1P49888 294 aa23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 SRSF5Q13243 272 aaKnown RBP23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 EIF4EBP2Q13542 120 aaPredicted RBP23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 CRY1Q16526 586 aa23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 CLEC16AQ2KHT3 1053 aa23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 OTUD1Q5VV17 481 aaPredicted RBP23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 CHSY1Q86X52 802 aa23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 HJURPQ8NCD3 748 aaPredicted RBP23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 KCNV2Q8TDN2 545 aa23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 BTN2A3PQ96KV6 586 aa23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 AGPAT1Q99943 283 aa23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 SLC2A11Q9BYW1 496 aa23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 EPC1Q9H2F5 836 aa23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 TSPY26PQ9H489 355 aa23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 RRN3Q9NYV6 651 aa23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 HCN2Q9UL51 889 aa23.16■■□□□ 1.3
PTCHD3P2-201ENST00000424937 M0QYT0 321 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 ADAM23O75077 832 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 SLC2A3P11169 496 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 UNGP13051 313 aaPredicted RBP23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 ABCB4P21439 1286 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 CCR1P32246 355 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 WASP42768 502 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 DGKEP52429 567 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 CENPCQ03188 943 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 RAP1GAP2Q684P5 730 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 TMEM92Q6UXU6 159 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 PHLDB2Q86SQ0 1253 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 MYEOVQ96EZ4 313 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 NPY6RQ99463 290 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 IRX2Q9BZI1 471 aaPredicted RBP23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 TTYH3Q9C0H2 523 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 METTL5Q9NRN9 209 aaKnown RBP23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 STIM2Q9P246 746 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 SLC12A6Q9UHW9 1150 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 SMG5Q9UPR3 1016 aaKnown RBP23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 USP34Q70CQ2 3546 aa23.15■■□□□ 1.3
PTCHD3P2-201ENST00000424937 MUC22E2RYF6 1773 aaPredicted RBP23.14■■□□□ 1.3
PTCHD3P2-201ENST00000424937 FAM186AA6NE01 2351 aa23.14■■□□□ 1.3
PTCHD3P2-201ENST00000424937 CCDC163A0A0D9SF12 145 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 AXIN1O15169 862 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 HNRNPLP14866 589 aaKnown RBP eCLIP23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 TFE3P19532 575 aaPredicted RBP23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 NTSR1P30989 418 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 FLT3P36888 993 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 RPS24P62847 133 aaKnown RBP23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ASIC2Q16515 512 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 MS4A13Q5J8X5 152 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 MPP7Q5T2T1 576 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ANO7Q6IWH7 933 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 LRSAM1Q6UWE0 723 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 PRR23BQ6ZRT6 265 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CHPFQ8IZ52 775 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 LGI2Q8N0V4 545 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ACOX2Q99424 681 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ADAM33Q9BZ11 813 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 IFNKQ9P0W0 207 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CALCOCO1Q9P1Z2 691 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CKAP5Q14008 2032 aa23.14■■□□□ 1.29
PTCHD3P2-201ENST00000424937 RALGAPA1Q6GYQ0 2036 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 KCNU1A8MYU2 1149 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 HOXB2P14652 356 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 TACR2P21452 398 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 HLA-FP30511 346 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CNR2P34972 360 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 SFMBT2Q5VUG0 894 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 TRNP1Q6NT89 227 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 IRF2BP2Q7Z5L9 587 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 SUMF1Q8NBK3 374 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 WFDC5Q8TCV5 224 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 UCMAQ8WVF2 138 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 TBCBQ99426 244 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CIPCQ9C0C6 399 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 POLMQ9NP87 494 aaPredicted RBP23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 PIGVQ9NUD9 493 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ABCB8Q9NUT2 735 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ADAM22Q9P0K1 906 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 TMEM59LQ9UK28 342 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 PLXND1Q9Y4D7 1925 aa23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 RIF1Q5UIP0 2472 aaKnown RBP23.13■■□□□ 1.29
PTCHD3P2-201ENST00000424937 TCRBV21S2A2A0A5A6 115 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 F5H5T6 163 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 HRO43593 1189 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 DEUP1Q05D60 604 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 PTP4A2Q12974 167 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 SIM2Q14190 667 aaPredicted RBP23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 EIF4HQ15056 248 aaKnown RBP23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 LPAL2Q16609 132 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 SLC25A52Q3SY17 297 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 E4F1Q66K89 784 aaPredicted RBP23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 RNF43Q68DV7 783 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 SDE2Q6IQ49 451 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CEP68Q76N32 757 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 SND1Q7KZF4 910 aaKnown RBP eCLIP23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 PHF13Q86YI8 300 aaPredicted RBP23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 MFN1Q8IWA4 741 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CFAP52Q8N1V2 620 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 EMC1Q8N766 993 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 TPSD1Q9BZJ3 242 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms