RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 KRT19P08727 400 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 TSHRP16473 764 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 MED21Q13503 144 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 TRPC3Q13507 836 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 CAPSQ13938 189 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 TRIP10Q15642 601 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 PDCD2Q16342 344 aaPredicted RBP14.78□□□□□ -0.04
MSH5-206ENST00000423982 BRSK2Q8IWQ3 736 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 UBA3Q8TBC4 463 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 DNAJC1Q96KC8 554 aaKnown RBP14.78□□□□□ -0.04
MSH5-206ENST00000423982 MAGEB5Q9BZ81 275 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 ZNF518BQ9C0D4 1074 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 GPAMQ9HCL2 828 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 IL1RAPL1Q9NZN1 696 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 MGAMO43451 1857 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 LDHAP00338 332 aaKnown RBP14.78□□□□□ -0.04
MSH5-206ENST00000423982 HMGCRP04035 888 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 LGALS2P05162 132 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 ZNF865P0CJ78 1059 aaPredicted RBP14.78□□□□□ -0.04
MSH5-206ENST00000423982 VCLP18206 1134 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 SERPINB6P35237 376 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 DUSP28Q4G0W2 176 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 RABGAP1LQ5R372 815 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 FAM102AQ5T9C2 384 aaPredicted RBP14.78□□□□□ -0.04
MSH5-206ENST00000423982 KYAT3Q6YP21 454 aaKnown RBP14.78□□□□□ -0.04
MSH5-206ENST00000423982 FAM43BQ6ZT52 329 aaPredicted RBP14.78□□□□□ -0.04
MSH5-206ENST00000423982 TLK2Q86UE8 772 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 ST13P4Q8IZP2 240 aaPredicted RBP14.78□□□□□ -0.04
MSH5-206ENST00000423982 NCSTNQ92542 709 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 PGLYRP2Q96PD5 576 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 SDCBP2Q9H190 292 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 XYLT2Q9H1B5 865 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 PNPLA8Q9NP80 782 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 EMCNQ9ULC0 261 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 TBC1D30Q9Y2I9 924 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 IGKV6D-21A0A0A0MT36 114 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 MYOCOSA0A1B0GUC4 107 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 CHADO15335 359 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 SIN3BO75182 1162 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 HOXC6P09630 235 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 RAG1P15918 1043 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 AOC1P19801 751 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 PRKCHP24723 683 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 NAMPTP43490 491 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 INHBCP55103 352 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 USP4Q13107 963 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 DYNC1I2Q13409 638 aaKnown RBP14.77□□□□□ -0.04
MSH5-206ENST00000423982 LAMC2Q13753 1193 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 HNRNPDQ14103 355 aaKnown RBP14.77□□□□□ -0.04
MSH5-206ENST00000423982 TEDDM1Q5T9Z0 273 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 SCYL2Q6P3W7 929 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 PHTF2Q8N3S3 785 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 TRPV1Q8NER1 839 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 NAT14Q8WUY8 206 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 GCNAQ96QF7 691 aa14.77□□□□□ -0.04
MSH5-206ENST00000423982 G3BP2Q9UN86 482 aaKnown RBP14.77□□□□□ -0.04
MSH5-206ENST00000423982 H0YCG3 227 aa14.77□□□□□ -0.05
MSH5-206ENST00000423982 FKBP6O75344 327 aa14.77□□□□□ -0.05
MSH5-206ENST00000423982 METTL18O95568 372 aa14.77□□□□□ -0.05
MSH5-206ENST00000423982 PIGRP01833 764 aa14.77□□□□□ -0.05
MSH5-206ENST00000423982 UQCRBP14927 111 aa14.77□□□□□ -0.05
MSH5-206ENST00000423982 ARL2P36404 184 aa14.77□□□□□ -0.05
MSH5-206ENST00000423982 YWHAEP62258 255 aaKnown RBP14.77□□□□□ -0.05
MSH5-206ENST00000423982 MMEL1Q495T6 779 aa14.77□□□□□ -0.05
MSH5-206ENST00000423982 DEFB107AQ8IZN7 70 aa14.77□□□□□ -0.05
MSH5-206ENST00000423982 NETO2Q8NC67 525 aa14.77□□□□□ -0.05
MSH5-206ENST00000423982 SLC7A3Q8WY07 619 aa14.77□□□□□ -0.05
MSH5-206ENST00000423982 RSAD1Q9HA92 442 aa14.77□□□□□ -0.05
MSH5-206ENST00000423982 MAN1C1Q9NR34 630 aa14.77□□□□□ -0.05
MSH5-206ENST00000423982 CDH22Q9UJ99 828 aa14.77□□□□□ -0.05
MSH5-206ENST00000423982 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.76□□□□□ -0.05
MSH5-206ENST00000423982 CAPN8A6NHC0 703 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 PGK1P00558 417 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 SRGAP2CP0DJJ0 459 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 POLR2BP30876 1174 aaKnown RBP14.76□□□□□ -0.05
MSH5-206ENST00000423982 WASHC5Q12768 1159 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 LSAMPQ13449 338 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 CA9Q16790 459 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 GRAMD1BQ3KR37 738 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 MBLAC2Q68D91 279 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 ZNF534Q76KX8 674 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 SESTD1Q86VW0 696 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 SPATA24Q86W54 205 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 WDR49Q8IV35 697 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 TRIM42Q8IWZ5 723 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 TMEM192Q8IY95 271 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 PLD5Q8N7P1 536 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 PIWIL2Q8TC59 973 aaKnown RBP14.76□□□□□ -0.05
MSH5-206ENST00000423982 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.76□□□□□ -0.05
MSH5-206ENST00000423982 HAPLN3Q96S86 360 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 OXCT2Q9BYC2 517 aaPredicted RBP14.76□□□□□ -0.05
MSH5-206ENST00000423982 FRMD8P1Q9BZ68 369 aaPredicted RBP14.76□□□□□ -0.05
MSH5-206ENST00000423982 KLHL4Q9C0H6 718 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 C1orf21Q9H246 121 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 DHX33Q9H6R0 707 aaKnown RBP14.76□□□□□ -0.05
MSH5-206ENST00000423982 ACSS2Q9NR19 701 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 THAP1Q9NVV9 213 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 POMPQ9Y244 141 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 GPR25O00155 361 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 DKC1O60832 514 aaKnown RBP eCLIP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms