RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 A0A1W2PPC4 97 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 C21orf59P57076 290 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 SHBQ15464 509 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 TRIP4Q15650 581 aaPredicted RBP17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 FNDC3BQ53EP0 1204 aaKnown RBP17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 PPP1R26Q5T8A7 1209 aaPredicted RBP17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 KIAA0895LQ68EN5 471 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 FBXL19Q6PCT2 694 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 USP30Q70CQ3 517 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 GATAD2AQ86YP4 633 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 ARHGAP18Q8N392 663 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 LINC00301Q8NCQ3 95 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 TMC2Q8TDI7 906 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 SAP25Q8TEE9 199 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 CYB5D2Q8WUJ1 264 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 PLD4Q96BZ4 506 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 CYP3A43Q9HB55 503 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 SUN2Q9UH99 717 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 STOML2Q9UJZ1 356 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 STRIP2Q9ULQ0 834 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 SCML1Q9UN30 329 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 ZNF462Q96JM2 2506 aa17.49■□□□□ 0.39
CHCHD3-202ENST00000423635 SLC12A8A0AV02 714 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 CAPN8A6NHC0 703 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 C10orf142B7Z368 130 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 SYT1P21579 422 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 ACADVLP49748 655 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 CLDN6P56747 220 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 ZNF445P59923 1031 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 DNAJC3Q13217 504 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 TTC31Q49AM3 519 aaPredicted RBP17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 RAB41Q5JT25 222 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 PRAMEF14Q5SWL7 426 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 PCSK4Q6UW60 755 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 CHST9Q7L1S5 443 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 ZNF366Q8N895 744 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 FGF11Q92914 225 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 SKA1Q96BD8 255 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 BACH2Q9BYV9 841 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 MUC22E2RYF6 1773 aaPredicted RBP17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 TENM4Q6N022 2769 aa17.48■□□□□ 0.39
CHCHD3-202ENST00000423635 CBX4O00257 560 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 PPP6R2O75170 966 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 WNT1P04628 370 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 ITGAVP06756 1048 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 DLDP09622 509 aaKnown RBP17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 ILKQ13418 452 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 C1orf220Q5T0J3 134 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 HES3Q5TGS1 186 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 ZC3H3Q8IXZ2 948 aaKnown RBP17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 AHI1Q8N157 1196 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 ARID3AQ99856 593 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 RSPH9Q9H1X1 276 aaPredicted RBP17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 EBF2Q9HAK2 575 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 MAGEF1Q9HAY2 307 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 NCKAP1Q9Y2A7 1128 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 MGAQ8IWI9 3026 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 YKT6O15498 198 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 KIF20AO95235 890 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 HLA-DRAP01903 254 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 ATP5BP06576 529 aaKnown RBP17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 PABPC1P11940 636 aaKnown RBP17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 ABCB4P21439 1286 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 CASP1P29466 404 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 GALCP54803 685 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 YWHAGP61981 247 aaKnown RBP eCLIP17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 CFHR1Q03591 330 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 ZNF776Q68DI1 518 aaPredicted RBP17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 PM20D1Q6GTS8 502 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 RSRC2Q7L4I2 434 aaKnown RBP17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 TMA16Q96EY4 203 aaKnown RBP17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 SLC6A18Q96N87 628 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 DNAI2Q9GZS0 605 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 BLZF1Q9H2G9 400 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 ZSCAN16Q9H4T2 348 aaPredicted RBP17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 APOBEC3GQ9HC16 384 aaKnown RBP17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 ABCB8Q9NUT2 735 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 GGA2Q9UJY4 613 aa17.47■□□□□ 0.39
CHCHD3-202ENST00000423635 A0A1W2PR77 199 aa17.46■□□□□ 0.38
CHCHD3-202ENST00000423635 SPTLC2O15270 562 aa17.46■□□□□ 0.38
CHCHD3-202ENST00000423635 HARS2P49590 506 aaKnown RBP17.46■□□□□ 0.38
CHCHD3-202ENST00000423635 STK38Q15208 465 aa17.46■□□□□ 0.38
CHCHD3-202ENST00000423635 MBLAC2Q68D91 279 aa17.46■□□□□ 0.38
CHCHD3-202ENST00000423635 SHC4Q6S5L8 630 aa17.46■□□□□ 0.38
CHCHD3-202ENST00000423635 EID2Q8N6I1 236 aa17.46■□□□□ 0.38
CHCHD3-202ENST00000423635 RFFLQ8WZ73 363 aa17.46■□□□□ 0.38
CHCHD3-202ENST00000423635 TMEM176AQ96HP8 235 aa17.46■□□□□ 0.38
CHCHD3-202ENST00000423635 PABPC3Q9H361 631 aaKnown RBP17.46■□□□□ 0.38
CHCHD3-202ENST00000423635 ATMQ13315 3056 aa17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 J3QKU1 62 aa17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 LATS1O95835 1130 aa17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 SLFN14P0C7P3 912 aa17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 CD38P28907 300 aa17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 PIK3CAP42336 1068 aa17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 RXRGP48443 463 aa17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 TLE3Q04726 772 aa17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 SFSWAPQ12872 951 aaKnown RBP17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 MPP7Q5T2T1 576 aa17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 ADGRF1Q5T601 910 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms