RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 BTN2A3PQ96KV6 586 aa27.4■■□□□ 1.98
CDK9-202ENST00000421939 NAP1L5Q96NT1 182 aaPredicted RBP27.4■■□□□ 1.98
CDK9-202ENST00000421939 NUCKS1Q9H1E3 243 aaKnown RBP27.4■■□□□ 1.98
CDK9-202ENST00000421939 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.4■■□□□ 1.98
CDK9-202ENST00000421939 XPO7Q9UIA9 1087 aaKnown RBP27.4■■□□□ 1.98
CDK9-202ENST00000421939 RAB23Q9ULC3 237 aa27.4■■□□□ 1.98
CDK9-202ENST00000421939 PTPRZ1P23471 2315 aaPredicted RBP27.4■■□□□ 1.98
CDK9-202ENST00000421939 ZNF292O60281 2723 aa27.4■■□□□ 1.98
CDK9-202ENST00000421939 SYNJ2BP-COX16A0A087WUM0 186 aa27.39■■□□□ 1.98
CDK9-202ENST00000421939 A0A1W2PQC6 194 aa27.39■■□□□ 1.98
CDK9-202ENST00000421939 SLC2A3P11169 496 aa27.39■■□□□ 1.98
CDK9-202ENST00000421939 MATKP42679 507 aa27.39■■□□□ 1.98
CDK9-202ENST00000421939 RNF43Q68DV7 783 aa27.39■■□□□ 1.98
CDK9-202ENST00000421939 RASSF3Q86WH2 238 aa27.39■■□□□ 1.98
CDK9-202ENST00000421939 CHPFQ8IZ52 775 aa27.39■■□□□ 1.98
CDK9-202ENST00000421939 POLMQ9NP87 494 aaPredicted RBP27.39■■□□□ 1.98
CDK9-202ENST00000421939 RRN3Q9NYV6 651 aa27.39■■□□□ 1.98
CDK9-202ENST00000421939 COX16Q9P0S2 106 aa27.39■■□□□ 1.98
CDK9-202ENST00000421939 TYW5A2RUC4 315 aaKnown RBP27.38■■□□□ 1.97
CDK9-202ENST00000421939 GOLGA8SH3BPF8 625 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 TBL1XO60907 577 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 RPP40O75818 363 aaKnown RBP27.38■■□□□ 1.97
CDK9-202ENST00000421939 ALDH1A2O94788 518 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 HOXB2P14652 356 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 MMP8P22894 467 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 CCR1P32246 355 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 RNASE9P60153 205 aaKnown RBP27.38■■□□□ 1.97
CDK9-202ENST00000421939 EIF4HQ15056 248 aaKnown RBP27.38■■□□□ 1.97
CDK9-202ENST00000421939 MMS22LQ6ZRQ5 1243 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 CEP68Q76N32 757 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 ATP6V0D2Q8N8Y2 350 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 MDGA1Q8NFP4 955 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 RUBCNQ92622 972 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 ACOX2Q99424 681 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 HINFPQ9BQA5 517 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.38■■□□□ 1.97
CDK9-202ENST00000421939 SLC12A6Q9UHW9 1150 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 STAP1Q9ULZ2 295 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 MYO6Q9UM54 1294 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 CFAP54Q96N23 3096 aa27.38■■□□□ 1.97
CDK9-202ENST00000421939 GOLGA6L19H0YKK7 550 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 FERP16591 822 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 HLA-FP30511 346 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 WASP42768 502 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 NME3Q13232 169 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 LPAL2Q16609 132 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 MS4A13Q5J8X5 152 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 OTUD1Q5VV17 481 aaPredicted RBP27.37■■□□□ 1.97
CDK9-202ENST00000421939 SDE2Q6IQ49 451 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 CHSY1Q86X52 802 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 UCMAQ8WVF2 138 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 BAP1Q92560 729 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 RNF34Q969K3 372 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 MYEOVQ96EZ4 313 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 PCDHB18PQ96TA0 734 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 NPY6RQ99463 290 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 CACNA2D2Q9NY47 1150 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 NCDNQ9UBB6 729 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 EML5Q05BV3 1969 aa27.37■■□□□ 1.97
CDK9-202ENST00000421939 TCRBV21S2A2A0A5A6 115 aa27.36■■□□□ 1.97
CDK9-202ENST00000421939 KCNU1A8MYU2 1149 aa27.36■■□□□ 1.97
CDK9-202ENST00000421939 M0QYT0 321 aa27.36■■□□□ 1.97
CDK9-202ENST00000421939 CCDC172P0C7W6 258 aa27.36■■□□□ 1.97
CDK9-202ENST00000421939 UNGP13051 313 aaPredicted RBP27.36■■□□□ 1.97
CDK9-202ENST00000421939 ABCB4P21439 1286 aa27.36■■□□□ 1.97
CDK9-202ENST00000421939 RPS24P62847 133 aaKnown RBP27.36■■□□□ 1.97
CDK9-202ENST00000421939 FANCCQ00597 558 aa27.36■■□□□ 1.97
CDK9-202ENST00000421939 RAP1GAP2Q684P5 730 aa27.36■■□□□ 1.97
CDK9-202ENST00000421939 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.36■■□□□ 1.97
CDK9-202ENST00000421939 ZNF557Q8N988 423 aaPredicted RBP27.36■■□□□ 1.97
CDK9-202ENST00000421939 SLC30A5Q8TAD4 765 aa27.36■■□□□ 1.97
CDK9-202ENST00000421939 WFIKKN2Q8TEU8 576 aa27.36■■□□□ 1.97
CDK9-202ENST00000421939 GABRG3Q99928 467 aa27.36■■□□□ 1.97
CDK9-202ENST00000421939 C11orf70Q9BRQ4 267 aa27.36■■□□□ 1.97
CDK9-202ENST00000421939 TPSD1Q9BZJ3 242 aa27.36■■□□□ 1.97
CDK9-202ENST00000421939 ABCB8Q9NUT2 735 aa27.36■■□□□ 1.97
CDK9-202ENST00000421939 ELOVL2Q9NXB9 296 aa27.36■■□□□ 1.97
CDK9-202ENST00000421939 STIM2Q9P246 746 aa27.36■■□□□ 1.97
CDK9-202ENST00000421939 TACR2P21452 398 aa27.35■■□□□ 1.97
CDK9-202ENST00000421939 NSFP46459 744 aaKnown RBP27.35■■□□□ 1.97
CDK9-202ENST00000421939 SULT1E1P49888 294 aa27.35■■□□□ 1.97
CDK9-202ENST00000421939 CENPCQ03188 943 aa27.35■■□□□ 1.97
CDK9-202ENST00000421939 NR1I3Q14994 352 aa27.35■■□□□ 1.97
CDK9-202ENST00000421939 CLEC16AQ2KHT3 1053 aa27.35■■□□□ 1.97
CDK9-202ENST00000421939 LAIR1Q6GTX8 287 aa27.35■■□□□ 1.97
CDK9-202ENST00000421939 LGI2Q8N0V4 545 aa27.35■■□□□ 1.97
CDK9-202ENST00000421939 WFDC5Q8TCV5 224 aa27.35■■□□□ 1.97
CDK9-202ENST00000421939 AGPAT1Q99943 283 aa27.35■■□□□ 1.97
CDK9-202ENST00000421939 CIPCQ9C0C6 399 aa27.35■■□□□ 1.97
CDK9-202ENST00000421939 SEPT11Q9NVA2 429 aaKnown RBP27.35■■□□□ 1.97
CDK9-202ENST00000421939 CALCOCO1Q9P1Z2 691 aa27.35■■□□□ 1.97
CDK9-202ENST00000421939 GGA2Q9UJY4 613 aa27.35■■□□□ 1.97
CDK9-202ENST00000421939 GMEB2Q9UKD1 530 aa27.35■■□□□ 1.97
CDK9-202ENST00000421939 A0A1W2PQF6 199 aa27.34■■□□□ 1.97
CDK9-202ENST00000421939 NPC1O15118 1278 aa27.34■■□□□ 1.97
CDK9-202ENST00000421939 PABPC1P11940 636 aaKnown RBP27.34■■□□□ 1.97
CDK9-202ENST00000421939 FLT3P36888 993 aa27.34■■□□□ 1.97
CDK9-202ENST00000421939 MTA1Q13330 715 aa27.34■■□□□ 1.97
CDK9-202ENST00000421939 E2F5Q15329 346 aa27.34■■□□□ 1.97
CDK9-202ENST00000421939 TMEM215Q68D42 235 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms