RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 SIK2Q9H0K1 926 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 GOLPH3Q9H4A6 298 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 HS3ST4Q9Y661 456 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 ARNTLO00327 626 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 SPOPO43791 374 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 NFATC1O95644 943 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 COMTP21964 271 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 IL1R2P27930 398 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 SLC6A4P31645 630 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 VCPP55072 806 aaKnown RBP18.16■□□□□ 0.5
LINC00271-201ENST00000421378 TNK2Q07912 1038 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 SMTNL2Q2TAL5 461 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 RAP1GAP2Q684P5 730 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 CYP4V2Q6ZWL3 525 aaPredicted RBP18.16■□□□□ 0.5
LINC00271-201ENST00000421378 CHSY1Q86X52 802 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 CPNE8Q86YQ8 564 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 RNF135Q8IUD6 432 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 ADGRG2Q8IZP9 1017 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 FZD10Q9ULW2 581 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 SORCS3Q9UPU3 1222 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 ALG6Q9Y672 507 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 CAPN6Q9Y6Q1 641 aa18.16■□□□□ 0.5
LINC00271-201ENST00000421378 MYO10Q9HD67 2058 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 GOLGA6L7A0A1B0GV03 622 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 GRID2IPA4D2P6 1211 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 F5H5T6 163 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 SRFP11831 508 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 ARSAP15289 507 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 GGCXP38435 758 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 BOLA3Q53S33 107 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 ERMARDQ5T6L9 678 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 RFWD3Q6PCD5 774 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 TPGS1Q6ZTW0 290 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 SYCE1Q8N0S2 351 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 LRRC57Q8N9N7 239 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 KIAA1524Q8TCG1 905 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 C1orf74Q96LT6 269 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 NECAB3Q96P71 396 aaPredicted RBP18.15■□□□□ 0.5
LINC00271-201ENST00000421378 PRMT1Q99873 361 aaKnown RBP18.15■□□□□ 0.5
LINC00271-201ENST00000421378 SNRNP25Q9BV90 132 aaKnown RBP18.15■□□□□ 0.5
LINC00271-201ENST00000421378 ZWILCHQ9H900 591 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 HPS4Q9NQG7 708 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 SPHK2Q9NRA0 654 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 TRMT1Q9NXH9 659 aaKnown RBP18.15■□□□□ 0.5
LINC00271-201ENST00000421378 GTSE1Q9NYZ3 720 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 AP4E1Q9UPM8 1137 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 HYOU1Q9Y4L1 999 aa18.15■□□□□ 0.5
LINC00271-201ENST00000421378 MUC3AQ02505 3323 aa18.14■□□□□ 0.5
LINC00271-201ENST00000421378 NARSO43776 548 aaKnown RBP18.14■□□□□ 0.49
LINC00271-201ENST00000421378 PALMO75781 387 aa18.14■□□□□ 0.49
LINC00271-201ENST00000421378 ADH1CP00326 375 aa18.14■□□□□ 0.49
LINC00271-201ENST00000421378 CYP17A1P05093 508 aa18.14■□□□□ 0.49
LINC00271-201ENST00000421378 TACR2P21452 398 aa18.14■□□□□ 0.49
LINC00271-201ENST00000421378 GJC1P36383 396 aa18.14■□□□□ 0.49
LINC00271-201ENST00000421378 MLLT6P55198 1093 aaPredicted RBP18.14■□□□□ 0.49
LINC00271-201ENST00000421378 TAS2R40P59535 323 aa18.14■□□□□ 0.49
LINC00271-201ENST00000421378 RUNX3Q13761 415 aa18.14■□□□□ 0.49
LINC00271-201ENST00000421378 AUHQ13825 339 aaKnown RBP18.14■□□□□ 0.49
LINC00271-201ENST00000421378 HS1BP3Q53T59 392 aa18.14■□□□□ 0.49
LINC00271-201ENST00000421378 KCNT1Q5JUK3 1230 aa18.14■□□□□ 0.49
LINC00271-201ENST00000421378 LY6G5CQ5SRR4 150 aa18.14■□□□□ 0.49
LINC00271-201ENST00000421378 PSTKQ8IV42 348 aaKnown RBP18.14■□□□□ 0.49
LINC00271-201ENST00000421378 CPA6Q8N4T0 437 aa18.14■□□□□ 0.49
LINC00271-201ENST00000421378 ECT2Q9H8V3 914 aa18.14■□□□□ 0.49
LINC00271-201ENST00000421378 OR12D3Q9UGF7 316 aa18.14■□□□□ 0.49
LINC00271-201ENST00000421378 DUSP12Q9UNI6 340 aa18.14■□□□□ 0.49
LINC00271-201ENST00000421378 A0A0C4DFX4 3053 aa18.14■□□□□ 0.49
LINC00271-201ENST00000421378 TYW5A2RUC4 315 aaKnown RBP18.13■□□□□ 0.49
LINC00271-201ENST00000421378 TRDMT1O14717 391 aaKnown RBP18.13■□□□□ 0.49
LINC00271-201ENST00000421378 CYBBP04839 570 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 KRT7P08729 469 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 PFKPQ01813 784 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 DHCR24Q15392 516 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 ANO4Q32M45 955 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 TXNRD3NBQ6F5E7 133 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 POLNQ7Z5Q5 900 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 TMEM25Q86YD3 366 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 REXO1L1PQ8IX06 675 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 LGI2Q8N0V4 545 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 CCAR2Q8N163 923 aaKnown RBP18.13■□□□□ 0.49
LINC00271-201ENST00000421378 CSGALNACT1Q8TDX6 532 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 TEKT4Q8WW24 435 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 HSPH1Q92598 858 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 DNASE1L2Q92874 299 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 PRICKLE1Q96MT3 831 aaPredicted RBP18.13■□□□□ 0.49
LINC00271-201ENST00000421378 ALS2CR12Q96Q35 445 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 OSBPL2Q9H1P3 480 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 CD320Q9NPF0 282 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 TRPV5Q9NQA5 729 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.13■□□□□ 0.49
LINC00271-201ENST00000421378 GPATCH2LQ9NWQ4 482 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 VANGL2Q9ULK5 521 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 SNX10Q9Y5X0 201 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 TICRRQ7Z2Z1 1910 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 GOLGA6L9A6NEM1 432 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 OTOL1A6NHN0 477 aaPredicted RBP18.13■□□□□ 0.49
LINC00271-201ENST00000421378 GFRA2O00451 464 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 TSPAN3O60637 253 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 RARAP10276 462 aa18.13■□□□□ 0.49
LINC00271-201ENST00000421378 NR1H3Q13133 447 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms