RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 NETO2Q8NC67 525 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 GIPC2Q8TF65 315 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 PRCCQ92733 491 aaPredicted RBP21.66■■□□□ 1.06
GPC1-202ENST00000420138 FBXO32Q969P5 355 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 CDC42EP4Q9H3Q1 356 aaKnown RBP21.66■■□□□ 1.06
GPC1-202ENST00000420138 DNAJC17Q9NVM6 304 aaKnown RBP21.66■■□□□ 1.06
GPC1-202ENST00000420138 COMMD8Q9NX08 183 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.65■■□□□ 1.06
GPC1-202ENST00000420138 ERICH4A6NGS2 130 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 KCNU1A8MYU2 1149 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 RIPK2O43353 540 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 LRIG2O94898 1065 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 GJB5O95377 273 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 ZDHHC11BP0C7U3 371 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 GLUD2P49448 558 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 PPP2R5DQ14738 602 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 DDX53Q86TM3 631 aaKnown RBP21.65■■□□□ 1.06
GPC1-202ENST00000420138 RELL1Q8IUW5 271 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 TP53INP2Q8IXH6 220 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 SLC39A13Q96H72 371 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 ZBED2Q9BTP6 218 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 TTLL2Q9BWV7 592 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 TSPYL1Q9H0U9 437 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.65■■□□□ 1.06
GPC1-202ENST00000420138 CLIC5Q9NZA1 410 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 AFF4Q9UHB7 1163 aaKnown RBP21.65■■□□□ 1.06
GPC1-202ENST00000420138 SHOC2Q9UQ13 582 aa21.65■■□□□ 1.06
GPC1-202ENST00000420138 SLC38A8A6NNN8 435 aa21.64■■□□□ 1.06
GPC1-202ENST00000420138 SHBGP04278 402 aa21.64■■□□□ 1.06
GPC1-202ENST00000420138 CCR1P32246 355 aa21.64■■□□□ 1.06
GPC1-202ENST00000420138 TPI1P60174 286 aa21.64■■□□□ 1.06
GPC1-202ENST00000420138 HTRA4P83105 476 aaPredicted RBP21.64■■□□□ 1.06
GPC1-202ENST00000420138 SLC29A2Q14542 456 aa21.64■■□□□ 1.06
GPC1-202ENST00000420138 CDKL3Q8IVW4 592 aaPredicted RBP21.64■■□□□ 1.06
GPC1-202ENST00000420138 ZNF461Q8TAF7 563 aa21.64■■□□□ 1.06
GPC1-202ENST00000420138 RNF34Q969K3 372 aa21.64■■□□□ 1.06
GPC1-202ENST00000420138 SERPINB11Q96P15 392 aa21.64■■□□□ 1.06
GPC1-202ENST00000420138 HAPLN3Q96S86 360 aa21.64■■□□□ 1.06
GPC1-202ENST00000420138 FOXP3Q9BZS1 431 aa21.64■■□□□ 1.06
GPC1-202ENST00000420138 TCRBV7S3A2A0A539 114 aa21.64■■□□□ 1.05
GPC1-202ENST00000420138 VAV1P15498 845 aa21.64■■□□□ 1.05
GPC1-202ENST00000420138 ZNF135P52742 658 aaPredicted RBP21.64■■□□□ 1.05
GPC1-202ENST00000420138 GAD2Q05329 585 aa21.64■■□□□ 1.05
GPC1-202ENST00000420138 COL13A1Q5TAT6 717 aaPredicted RBP21.64■■□□□ 1.05
GPC1-202ENST00000420138 TRMT10CQ7L0Y3 403 aaKnown RBP21.64■■□□□ 1.05
GPC1-202ENST00000420138 PPIL6Q8IXY8 311 aa21.64■■□□□ 1.05
GPC1-202ENST00000420138 HERVK_113Q902F9 699 aa21.64■■□□□ 1.05
GPC1-202ENST00000420138 XPO7Q9UIA9 1087 aaKnown RBP21.64■■□□□ 1.05
GPC1-202ENST00000420138 NR2E3Q9Y5X4 410 aa21.64■■□□□ 1.05
GPC1-202ENST00000420138 SLC4A7Q9Y6M7 1214 aa21.64■■□□□ 1.05
GPC1-202ENST00000420138 PAGE1O75459 146 aa21.63■■□□□ 1.05
GPC1-202ENST00000420138 TBX18O95935 607 aa21.63■■□□□ 1.05
GPC1-202ENST00000420138 CEP85LQ5SZL2 805 aa21.63■■□□□ 1.05
GPC1-202ENST00000420138 MANEALQ5VSG8 457 aa21.63■■□□□ 1.05
GPC1-202ENST00000420138 PCGF5Q86SE9 256 aa21.63■■□□□ 1.05
GPC1-202ENST00000420138 TAB3Q8N5C8 712 aaPredicted RBP21.63■■□□□ 1.05
GPC1-202ENST00000420138 NPWQ8N729 165 aa21.63■■□□□ 1.05
GPC1-202ENST00000420138 FCRL2Q96LA5 508 aaPredicted RBP21.63■■□□□ 1.05
GPC1-202ENST00000420138 CEP295NLQ96MC4 621 aa21.63■■□□□ 1.05
GPC1-202ENST00000420138 LGMNQ99538 433 aa21.63■■□□□ 1.05
GPC1-202ENST00000420138 EPAS1Q99814 870 aa21.63■■□□□ 1.05
GPC1-202ENST00000420138 TLR6Q9Y2C9 796 aa21.63■■□□□ 1.05
GPC1-202ENST00000420138 CCDC85CA6NKD9 419 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 HACD1B0YJ81 288 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 TMEM63AO94886 807 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 TUFMP49411 452 aaKnown RBP21.62■■□□□ 1.05
GPC1-202ENST00000420138 PSEN1P49768 467 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 PRKD1Q15139 912 aaPredicted RBP21.62■■□□□ 1.05
GPC1-202ENST00000420138 HOOK3Q86VS8 718 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 RBM15Q96T37 977 aaKnown RBP eCLIP21.62■■□□□ 1.05
GPC1-202ENST00000420138 TLR8Q9NR97 1041 aaKnown RBP21.62■■□□□ 1.05
GPC1-202ENST00000420138 PAK5Q9P286 719 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 HSFX1Q9UBD0 423 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 MYO16Q9Y6X6 1858 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 CARNS1A5YM72 827 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 LILRB3O75022 631 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 GCATO75600 419 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 HOXC13P31276 330 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 ACTN2P35609 894 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 TPGS2Q68CL5 300 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 DENND2CQ68D51 928 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 BZW1Q7L1Q6 419 aaKnown RBP21.62■■□□□ 1.05
GPC1-202ENST00000420138 VPS52Q8N1B4 723 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 CCDC110Q8TBZ0 833 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 TFB1MQ8WVM0 346 aaKnown RBP21.62■■□□□ 1.05
GPC1-202ENST00000420138 AUTS2Q8WXX7 1259 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 PRDM12Q9H4Q4 367 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 NINJ2Q9NZG7 142 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 PRDM4Q9UKN5 801 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 INSL6Q9Y581 213 aa21.62■■□□□ 1.05
GPC1-202ENST00000420138 C5orf60A6NFR6 353 aa21.61■■□□□ 1.05
GPC1-202ENST00000420138 GOLGA6L10A6NI86 522 aa21.61■■□□□ 1.05
GPC1-202ENST00000420138 NDC80O14777 642 aa21.61■■□□□ 1.05
GPC1-202ENST00000420138 TTC4O95801 387 aa21.61■■□□□ 1.05
GPC1-202ENST00000420138 HMGA1P17096 107 aaKnown RBP21.61■■□□□ 1.05
GPC1-202ENST00000420138 EPHB2P29323 1055 aa21.61■■□□□ 1.05
GPC1-202ENST00000420138 RAB33AQ14088 237 aa21.61■■□□□ 1.05
GPC1-202ENST00000420138 KCNJ11Q14654 390 aa21.61■■□□□ 1.05
GPC1-202ENST00000420138 LEKR1Q6ZMV7 388 aa21.61■■□□□ 1.05
GPC1-202ENST00000420138 FIBCD1Q8N539 461 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms