RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 NCKIPSDQ9NZQ3 722 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 WHRNQ9P202 907 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 TRPV2Q9Y5S1 764 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 LINC00854A0A1B0GVQ3 168 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 MOXD2PA6NHM9 499 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 LTFP02788 710 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 ZNF7P17097 686 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-205ENST00000418258 ALKBH2Q6NS38 261 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 SLC27A1Q6PCB7 646 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 CCNI2Q6ZMN8 369 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-205ENST00000418258 RSPH1Q8WYR4 309 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 REPS1Q96D71 796 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 CLIP3Q96DZ5 547 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 SERPINB11Q96P15 392 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 ADAM2Q99965 735 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 A0A088AWK7 358 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 HS6ST1O60243 411 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 THRAP10827 490 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 ZNF10P21506 573 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-205ENST00000418258 ST13P50502 369 aaKnown RBP11.47□□□□□ -0.57
PTCH1-205ENST00000418258 CXCL9Q07325 125 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 MAPK7Q13164 816 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 GRB10Q13322 594 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 GNA13Q14344 377 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 DET1Q7L5Y6 550 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 HDDC2Q7Z4H3 204 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 SUGP1Q8IWZ8 645 aaKnown RBP11.47□□□□□ -0.57
PTCH1-205ENST00000418258 MCOLN3Q8TDD5 553 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 SYTL5Q8TDW5 730 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-205ENST00000418258 RHBGQ9H310 441 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 KRT33AO76009 404 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 HLA-DQA2P01906 255 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 TYMPP19971 482 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 ANTXR2P58335 489 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 TMEM154Q6P9G4 183 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 SLC30A10Q6XR72 485 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 MOSPD2Q8NHP6 518 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 CDCA5Q96FF9 252 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 LRRC4BQ9NT99 713 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 POLG2Q9UHN1 485 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 PPP1R3GB7ZBB8 358 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 GRIK3Q13003 919 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 NLRP9Q7RTR0 991 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 EPHX4Q8IUS5 362 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-205ENST00000418258 SAE1Q9UBE0 346 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-205ENST00000418258 ZNHIT2Q9UHR6 403 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 ENTPD4Q9Y227 616 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 USP31Q70CQ4 1352 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 CPS1P31327 1500 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 LRRIQ1Q96JM4 1722 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 EIF3HO15372 352 aaKnown RBP eCLIP11.47□□□□□ -0.57
PTCH1-205ENST00000418258 STX4Q12846 297 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 SLC45A4Q5BKX6 768 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 GPC2Q8N158 579 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 CXorf40AQ8TE69 158 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 MAGEB16A2A368 324 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 OR6A2O95222 327 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 KRT6AP02538 564 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 KRT6BP04259 564 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 HPCAL1P37235 193 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 KRT6CP48668 564 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 ATP12AP54707 1039 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 FNDC5Q8NAU1 212 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 PIK3R5Q8WYR1 880 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 CORO1BQ9BR76 489 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 RSPH9Q9H1X1 276 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-205ENST00000418258 PPRC1Q5VV67 1664 aaKnown RBP11.47□□□□□ -0.57
PTCH1-205ENST00000418258 SH3BGRLO75368 114 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 TAL1P17542 331 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-205ENST00000418258 AXLP30530 894 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 GPR15P49685 360 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 PABPC1LQ4VXU2 614 aaKnown RBP11.47□□□□□ -0.57
PTCH1-205ENST00000418258 ZNF720Q7Z2F6 126 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 BNIPLQ7Z465 357 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 MDM1Q8TC05 714 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 ZIM3Q96PE6 472 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 REXO4Q9GZR2 422 aaKnown RBP11.47□□□□□ -0.57
PTCH1-205ENST00000418258 CARD9Q9H257 536 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 PTPRHQ9HD43 1115 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 COMMD8Q9NX08 183 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 RRN3Q9NYV6 651 aa11.47□□□□□ -0.57
PTCH1-205ENST00000418258 ZBTB14O43829 449 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 NR2C2P49116 596 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 NAA30Q147X3 362 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-205ENST00000418258 C4orf19Q8IY42 314 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 UTP15Q8TED0 518 aaKnown RBP11.46□□□□□ -0.57
PTCH1-205ENST00000418258 SEMA4DQ92854 862 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 COL26A1Q96A83 441 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 FAM120BQ96EK7 910 aaKnown RBP11.46□□□□□ -0.57
PTCH1-205ENST00000418258 GALNT8Q9NY28 637 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 HEY2Q9UBP5 337 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 COQ6Q9Y2Z9 468 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 ACOT9Q9Y305 439 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 GPSM3Q9Y4H4 160 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 TRIM13O60858 407 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 RRM1P23921 792 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 ADCYAP1R1P41586 468 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 ZNF410Q86VK4 478 aa11.46□□□□□ -0.57
PTCH1-205ENST00000418258 DLC1Q96QB1 1528 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms