RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 GIMAP6Q6P9H5 292 aa3.38□□□□□ -1.87
APP-207ENST00000415997 MTHFD1LQ6UB35 978 aa3.38□□□□□ -1.87
APP-207ENST00000415997 USP30Q70CQ3 517 aa3.38□□□□□ -1.87
APP-207ENST00000415997 SYT13Q7L8C5 426 aa3.38□□□□□ -1.87
APP-207ENST00000415997 MFSD6LQ8IWD5 586 aa3.38□□□□□ -1.87
APP-207ENST00000415997 CEP76Q8TAP6 659 aa3.38□□□□□ -1.87
APP-207ENST00000415997 ING5Q8WYH8 240 aa3.38□□□□□ -1.87
APP-207ENST00000415997 SMARCD2Q92925 531 aa3.38□□□□□ -1.87
APP-207ENST00000415997 CHMP4CQ96CF2 233 aa3.38□□□□□ -1.87
APP-207ENST00000415997 EAF2Q96CJ1 260 aaPredicted RBP3.38□□□□□ -1.87
APP-207ENST00000415997 RSPRY1Q96DX4 576 aa3.38□□□□□ -1.87
APP-207ENST00000415997 MCRS1Q96EZ8 462 aa3.38□□□□□ -1.87
APP-207ENST00000415997 SCYL1Q96KG9 808 aa3.38□□□□□ -1.87
APP-207ENST00000415997 PCYT2Q99447 389 aa3.38□□□□□ -1.87
APP-207ENST00000415997 AGAP2Q99490 1192 aa3.38□□□□□ -1.87
APP-207ENST00000415997 DNAJC2Q99543 621 aaKnown RBP3.38□□□□□ -1.87
APP-207ENST00000415997 MEIS3Q99687 375 aa3.38□□□□□ -1.87
APP-207ENST00000415997 SENP7Q9BQF6 1050 aa3.38□□□□□ -1.87
APP-207ENST00000415997 TMEM175Q9BSA9 504 aa3.38□□□□□ -1.87
APP-207ENST00000415997 ZFP14Q9HCL3 533 aa3.38□□□□□ -1.87
APP-207ENST00000415997 DMRT1Q9Y5R6 373 aa3.38□□□□□ -1.87
APP-207ENST00000415997 RP1L1Q8IWN7 2480 aaPredicted RBP3.38□□□□□ -1.87
APP-207ENST00000415997 HELZP42694 1942 aaKnown RBP3.37□□□□□ -1.87
APP-207ENST00000415997 MED13Q9UHV7 2174 aa3.37□□□□□ -1.87
APP-207ENST00000415997 PNMA6EA0A0J9YXQ4 647 aa3.37□□□□□ -1.87
APP-207ENST00000415997 WDR27A2RRH5 827 aa3.37□□□□□ -1.87
APP-207ENST00000415997 NRP1O14786 923 aa3.37□□□□□ -1.87
APP-207ENST00000415997 ZNF263O14978 683 aa3.37□□□□□ -1.87
APP-207ENST00000415997 CHADO15335 359 aa3.37□□□□□ -1.87
APP-207ENST00000415997 CCL16O15467 120 aa3.37□□□□□ -1.87
APP-207ENST00000415997 NMT2O60551 498 aa3.37□□□□□ -1.87
APP-207ENST00000415997 MOSPD3O75425 235 aa3.37□□□□□ -1.87
APP-207ENST00000415997 RHOP08100 348 aa3.37□□□□□ -1.87
APP-207ENST00000415997 ZNF883P0CG24 379 aa3.37□□□□□ -1.87
APP-207ENST00000415997 KRT15P19012 456 aa3.37□□□□□ -1.87
APP-207ENST00000415997 BMP5P22003 454 aa3.37□□□□□ -1.87
APP-207ENST00000415997 ADD2P35612 726 aa3.37□□□□□ -1.87
APP-207ENST00000415997 DCTP40126 519 aa3.37□□□□□ -1.87
APP-207ENST00000415997 P2RY2P41231 377 aa3.37□□□□□ -1.87
APP-207ENST00000415997 VIPR2P41587 438 aa3.37□□□□□ -1.87
APP-207ENST00000415997 CCR2P41597 374 aa3.37□□□□□ -1.87
APP-207ENST00000415997 ETV4P43268 484 aa3.37□□□□□ -1.87
APP-207ENST00000415997 DHPSP49366 369 aaPredicted RBP3.37□□□□□ -1.87
APP-207ENST00000415997 MEOX1P50221 254 aa3.37□□□□□ -1.87
APP-207ENST00000415997 IGBP1P78318 339 aa3.37□□□□□ -1.87
APP-207ENST00000415997 TFAP4Q01664 338 aa3.37□□□□□ -1.87
APP-207ENST00000415997 GFPT1Q06210 699 aaPredicted RBP3.37□□□□□ -1.87
APP-207ENST00000415997 CCDC173Q0VFZ6 552 aa3.37□□□□□ -1.87
APP-207ENST00000415997 HSP90AA2PQ14568 343 aaPredicted RBP3.37□□□□□ -1.87
APP-207ENST00000415997 PCOLCEQ15113 449 aa3.37□□□□□ -1.87
APP-207ENST00000415997 DUOXA1Q1HG43 343 aa3.37□□□□□ -1.87
APP-207ENST00000415997 TBC1D25Q3MII6 688 aa3.37□□□□□ -1.87
APP-207ENST00000415997 LINC00303Q3SY05 128 aa3.37□□□□□ -1.87
APP-207ENST00000415997 USH1GQ495M9 461 aa3.37□□□□□ -1.87
APP-207ENST00000415997 PREPLQ4J6C6 727 aaPredicted RBP3.37□□□□□ -1.87
APP-207ENST00000415997 NOMO2Q5JPE7 1267 aa3.37□□□□□ -1.87
APP-207ENST00000415997 C1QL3Q5VWW1 255 aa3.37□□□□□ -1.87
APP-207ENST00000415997 RTL10Q7L3V2 364 aa3.37□□□□□ -1.87
APP-207ENST00000415997 TMPRSS12Q86WS5 348 aa3.37□□□□□ -1.87
APP-207ENST00000415997 MCF2L2Q86YR7 1114 aa3.37□□□□□ -1.87
APP-207ENST00000415997 ARID3BQ8IVW6 561 aaPredicted RBP3.37□□□□□ -1.87
APP-207ENST00000415997 IFNL3Q8IZI9 196 aa3.37□□□□□ -1.87
APP-207ENST00000415997 ZNF444Q8N0Y2 327 aaPredicted RBP3.37□□□□□ -1.87
APP-207ENST00000415997 MMP21Q8N119 569 aa3.37□□□□□ -1.87
APP-207ENST00000415997 TRAPPC12Q8WVT3 735 aa3.37□□□□□ -1.87
APP-207ENST00000415997 CNOT6LQ96LI5 555 aaKnown RBP3.37□□□□□ -1.87
APP-207ENST00000415997 SEMA3CQ99985 751 aa3.37□□□□□ -1.87
APP-207ENST00000415997 GTPBP2Q9BX10 602 aaKnown RBP3.37□□□□□ -1.87
APP-207ENST00000415997 ZDHHC5Q9C0B5 715 aa3.37□□□□□ -1.87
APP-207ENST00000415997 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.37□□□□□ -1.87
APP-207ENST00000415997 CATSPERZQ9NTU4 200 aa3.37□□□□□ -1.87
APP-207ENST00000415997 PARPBPQ9NWS1 579 aa3.37□□□□□ -1.87
APP-207ENST00000415997 MAP3K20Q9NYL2 800 aaKnown RBP3.37□□□□□ -1.87
APP-207ENST00000415997 ISY1Q9ULR0 285 aaKnown RBP3.37□□□□□ -1.87
APP-207ENST00000415997 HDAC5Q9UQL6 1122 aa3.37□□□□□ -1.87
APP-207ENST00000415997 GIT1Q9Y2X7 761 aa3.37□□□□□ -1.87
APP-207ENST00000415997 MRPS23Q9Y3D9 190 aaKnown RBP3.37□□□□□ -1.87
APP-207ENST00000415997 R3HCC1Q9Y3T6 440 aaKnown RBP3.37□□□□□ -1.87
APP-207ENST00000415997 TNFRSF18Q9Y5U5 241 aa3.37□□□□□ -1.87
APP-207ENST00000415997 SLC4A4Q9Y6R1 1079 aa3.37□□□□□ -1.87
APP-207ENST00000415997 THADAQ6YHU6 1953 aa3.37□□□□□ -1.87
APP-207ENST00000415997 MED13LQ71F56 2210 aa3.37□□□□□ -1.87
APP-207ENST00000415997 KAT6AQ92794 2004 aa3.37□□□□□ -1.87
APP-207ENST00000415997 PHLPP2Q6ZVD8 1323 aa3.37□□□□□ -1.87
APP-207ENST00000415997 PKD1L1Q8TDX9 2849 aa3.37□□□□□ -1.87
APP-207ENST00000415997 PDCD11Q14690 1871 aaKnown RBP3.37□□□□□ -1.87
APP-207ENST00000415997 PCSK5Q92824 1860 aa3.37□□□□□ -1.87
APP-207ENST00000415997 PTPRDP23468 1912 aa3.36□□□□□ -1.87
APP-207ENST00000415997 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.36□□□□□ -1.87
APP-207ENST00000415997 ESYT2A0FGR8 921 aa3.36□□□□□ -1.87
APP-207ENST00000415997 PRAMEF25A6NGN4 478 aa3.36□□□□□ -1.87
APP-207ENST00000415997 FAM90A27PA6NNH2 459 aa3.36□□□□□ -1.87
APP-207ENST00000415997 F8W810 466 aa3.36□□□□□ -1.87
APP-207ENST00000415997 K7ENP7 123 aa3.36□□□□□ -1.87
APP-207ENST00000415997 KCNK3O14649 394 aa3.36□□□□□ -1.87
APP-207ENST00000415997 TRDMT1O14717 391 aaKnown RBP3.36□□□□□ -1.87
APP-207ENST00000415997 FIBPO43427 364 aa3.36□□□□□ -1.87
APP-207ENST00000415997 BRINP1O60477 761 aa3.36□□□□□ -1.87
APP-207ENST00000415997 STAM2O75886 525 aa3.36□□□□□ -1.87
APP-207ENST00000415997 ALDH2P05091 517 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms