RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 FAM102AQ5T9C2 384 aaPredicted RBP13.44□□□□□ -0.26
CLINT1-201ENST00000411809 RSPH3Q86UC2 560 aa13.44□□□□□ -0.26
CLINT1-201ENST00000411809 KCTD6Q8NC69 237 aa13.44□□□□□ -0.26
CLINT1-201ENST00000411809 TRAPPC9Q96Q05 1148 aa13.44□□□□□ -0.26
CLINT1-201ENST00000411809 ADPGKQ9BRR6 497 aa13.44□□□□□ -0.26
CLINT1-201ENST00000411809 EIF2AQ9BY44 585 aaKnown RBP13.44□□□□□ -0.26
CLINT1-201ENST00000411809 C20orf27Q9GZN8 174 aa13.44□□□□□ -0.26
CLINT1-201ENST00000411809 CLIC5Q9NZA1 410 aa13.44□□□□□ -0.26
CLINT1-201ENST00000411809 TRIP12Q14669 1992 aaPredicted RBP13.43□□□□□ -0.26
CLINT1-201ENST00000411809 BCLAF3A2AJT9 711 aaKnown RBP13.43□□□□□ -0.26
CLINT1-201ENST00000411809 PAPSS1O43252 624 aaPredicted RBP13.43□□□□□ -0.26
CLINT1-201ENST00000411809 ZMPSTE24O75844 475 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 DHRS4L1P0CG22 281 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 SERPINB6P35237 376 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 HDAC4P56524 1084 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 ASPHQ12797 758 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 PCBP1Q15365 356 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLINT1-201ENST00000411809 SOWAHAQ2M3V2 549 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 LRRC23Q53EV4 343 aaPredicted RBP13.43□□□□□ -0.26
CLINT1-201ENST00000411809 FAM47CQ5HY64 1035 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 DARS2Q6PI48 645 aaKnown RBP13.43□□□□□ -0.26
CLINT1-201ENST00000411809 C1orf228Q6PIY5 440 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 GPR142Q7Z601 462 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 SPATA18Q8TC71 538 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 E2F7Q96AV8 911 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 HEXIM2Q96MH2 286 aaKnown RBP13.43□□□□□ -0.26
CLINT1-201ENST00000411809 TUBGCP4Q9UGJ1 667 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 MAD1L1Q9Y6D9 718 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 CHADO15335 359 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 LYPLA1O75608 230 aaPredicted RBP13.43□□□□□ -0.26
CLINT1-201ENST00000411809 F2P00734 622 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 STIP1P31948 543 aaKnown RBP13.43□□□□□ -0.26
CLINT1-201ENST00000411809 PDK2Q15119 407 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 ZNF534Q76KX8 674 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 PCDH19Q8TAB3 1148 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 ALKBH8Q96BT7 664 aaKnown RBP13.43□□□□□ -0.26
CLINT1-201ENST00000411809 PCDH18Q9HCL0 1135 aa13.43□□□□□ -0.26
CLINT1-201ENST00000411809 HAS3O00219 553 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 PTPN9P43378 593 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 SLC6A3Q01959 620 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 GOLGA7BQ2TAP0 167 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 DENND5BQ6ZUT9 1274 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 UNC93AQ86WB7 457 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 NPLOC4Q8TAT6 608 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 ZFAND2BQ8WV99 257 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 PPP1R16BQ96T49 567 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 RAB6BQ9NRW1 208 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLINT1-201ENST00000411809 GDAP2Q9NXN4 497 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 H7C0C1 242 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 TFE3P19532 575 aaPredicted RBP13.42□□□□□ -0.26
CLINT1-201ENST00000411809 TGM2P21980 687 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 ATP5OP48047 213 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 PDE1BQ01064 536 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 CA9Q16790 459 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 TCHHL1Q5QJ38 904 aaPredicted RBP13.42□□□□□ -0.26
CLINT1-201ENST00000411809 UBXN11Q5T124 520 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 C16orf46Q6P387 395 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 SLC27A1Q6PCB7 646 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 ZDHHC17Q8IUH5 632 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 CRYBG2Q8N1P7 616 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 DNAJC1Q96KC8 554 aaKnown RBP13.42□□□□□ -0.26
CLINT1-201ENST00000411809 TBCBQ99426 244 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 PTPN18Q99952 460 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 SPATA16Q9BXB7 569 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 DNAJC6O75061 913 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 CCNA1P78396 465 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 KRT72Q14CN4 511 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 DPYSL2Q16555 572 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 CDO1Q16878 200 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 LIN52Q52LA3 116 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 OTUD1Q5VV17 481 aaPredicted RBP13.42□□□□□ -0.26
CLINT1-201ENST00000411809 C9orf57Q5W0N0 161 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 NLRP7Q8WX94 980 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 UPF1Q92900 1129 aaKnown RBP eCLIP13.42□□□□□ -0.264e-9■□□□□ 8.2
CLINT1-201ENST00000411809 ZNF670Q9BS34 389 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 TAGLN3Q9UI15 199 aa13.42□□□□□ -0.26
CLINT1-201ENST00000411809 A8MXQ7 604 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 TM7SF2O76062 418 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 GRAMD1BQ3KR37 738 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.41□□□□□ -0.26
CLINT1-201ENST00000411809 SFT2D3Q587I9 215 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 IQSEC1Q6DN90 963 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 SATL1Q86VE3 508 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 CAND1Q86VP6 1230 aaKnown RBP13.41□□□□□ -0.26
CLINT1-201ENST00000411809 NDUFAF2Q8N183 169 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 KIF12Q96FN5 646 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 HESX1Q9UBX0 185 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 HEY1Q9Y5J3 304 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 NLRC5Q86WI3 1866 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 SMIM35A0A1B0GVV1 85 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 APRTP07741 180 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 KCNE1P15382 129 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 PDGFRAP16234 1089 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 L1CAMP32004 1257 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 ATXN3P54252 364 aaPredicted RBP13.41□□□□□ -0.26
CLINT1-201ENST00000411809 ACTR3P61158 418 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 SLC18A2Q05940 514 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 SPDYAQ5MJ70 313 aa13.41□□□□□ -0.26
CLINT1-201ENST00000411809 MORN1Q5T089 497 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms