RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.43□□□□□ -0.42
NEDD1-202ENST00000411739 ITIH6Q6UXX5 1313 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 USP34Q70CQ2 3546 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 FTLP02792 175 aaPredicted RBP12.42□□□□□ -0.42
NEDD1-202ENST00000411739 KRT3P12035 628 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 PDGFRAP16234 1089 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 HOXD9P28356 352 aaPredicted RBP12.42□□□□□ -0.42
NEDD1-202ENST00000411739 RPL7AP62424 266 aaKnown RBP12.42□□□□□ -0.42
NEDD1-202ENST00000411739 GEN1Q17RS7 908 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 CCDC14Q49A88 953 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 PIK3R6Q5UE93 754 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 WDR59Q6PJI9 974 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 CHSY1Q86X52 802 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 FAM131BQ86XD5 332 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 ALLCQ8N6M5 410 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 MAGEB5Q9BZ81 275 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.42□□□□□ -0.42
NEDD1-202ENST00000411739 STOML2Q9UJZ1 356 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 R4GN57 208 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 KCNU1A8MYU2 1149 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 GFRA2O00451 464 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 CALB1P05937 261 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 SP9P0CG40 484 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 ABCB4P21439 1286 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 CCR1P32246 355 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 CXCL12P48061 93 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 NNTQ13423 1086 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 SLC25A52Q3SY17 297 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 MPPE1Q53F39 396 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 C14orf80Q86SX3 495 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 SPEM1Q8N4L4 309 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 TERB1Q8NA31 727 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 USP33Q8TEY7 942 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 SORCS1Q8WY21 1168 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 MCEEQ96PE7 176 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 ACOX2Q99424 681 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 TKTL2Q9H0I9 626 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 ARHGAP20Q9P2F6 1191 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 STAP1Q9ULZ2 295 aa12.42□□□□□ -0.42
NEDD1-202ENST00000411739 VPS13AQ96RL7 3174 aa12.41□□□□□ -0.42
NEDD1-202ENST00000411739 PAGE1O75459 146 aa12.41□□□□□ -0.42
NEDD1-202ENST00000411739 SERPING1P05155 500 aa12.41□□□□□ -0.42
NEDD1-202ENST00000411739 TACR2P21452 398 aa12.41□□□□□ -0.42
NEDD1-202ENST00000411739 IRAK1P51617 712 aa12.41□□□□□ -0.42
NEDD1-202ENST00000411739 C1QBPQ07021 282 aaKnown RBP12.41□□□□□ -0.42
NEDD1-202ENST00000411739 MS4A13Q5J8X5 152 aa12.41□□□□□ -0.42
NEDD1-202ENST00000411739 DNAJC24Q6P3W2 148 aa12.41□□□□□ -0.42
NEDD1-202ENST00000411739 ATP6V0D2Q8N8Y2 350 aa12.41□□□□□ -0.42
NEDD1-202ENST00000411739 NT5C3BQ969T7 300 aa12.41□□□□□ -0.42
NEDD1-202ENST00000411739 EXOC4Q96A65 974 aa12.41□□□□□ -0.42
NEDD1-202ENST00000411739 BTN2A3PQ96KV6 586 aa12.41□□□□□ -0.42
NEDD1-202ENST00000411739 HHIPQ96QV1 700 aa12.41□□□□□ -0.42
NEDD1-202ENST00000411739 WDCPQ9H6R7 721 aa12.41□□□□□ -0.42
NEDD1-202ENST00000411739 MYO1AQ9UBC5 1043 aa12.41□□□□□ -0.42
NEDD1-202ENST00000411739 A0A087X0T9 212 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 TCRBV5S1A1TA0A578 114 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 C2CD4BA6NLJ0 364 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.4□□□□□ -0.42
NEDD1-202ENST00000411739 KLF8O95600 359 aaPredicted RBP12.4□□□□□ -0.42
NEDD1-202ENST00000411739 FAM228BP0C875 321 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 SCNN1AP37088 669 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 EIF2DP41214 584 aaKnown RBP12.4□□□□□ -0.42
NEDD1-202ENST00000411739 EGFLAMQ63HQ2 1017 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 CARNMT1Q8N4J0 409 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 TXNDC5Q8NBS9 432 aaKnown RBP12.4□□□□□ -0.42
NEDD1-202ENST00000411739 TRIM7Q9C029 511 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 SLC12A6Q9UHW9 1150 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 FBXO10Q9UK96 956 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 HS3ST4Q9Y661 456 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 MYO18AQ92614 2054 aaKnown RBP12.4□□□□□ -0.42
NEDD1-202ENST00000411739 WASH3PC4AMC7 463 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 SGK1O00141 431 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 LATS1O95835 1130 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 HNRNPLP14866 589 aaKnown RBP eCLIP12.4□□□□□ -0.42
NEDD1-202ENST00000411739 HLA-FP30511 346 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 CD70P32970 193 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 EIF4A3P38919 411 aaKnown RBP12.4□□□□□ -0.42
NEDD1-202ENST00000411739 MAGEA9P43362 315 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 KIR2DL1P43626 348 aaPredicted RBP12.4□□□□□ -0.42
NEDD1-202ENST00000411739 CXCR3P49682 368 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 PTPN5P54829 565 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 OGDHQ02218 1023 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 TMEM215Q68D42 235 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 SARM1Q6SZW1 724 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 SYNPOQ8N3V7 929 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 IL17RCQ8NAC3 791 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 C3orf20Q8ND61 904 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 SYN2Q92777 582 aaPredicted RBP12.4□□□□□ -0.42
NEDD1-202ENST00000411739 IGSF8Q969P0 613 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 AZIN2Q96A70 460 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 CHP1Q99653 195 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 ABCB8Q9NUT2 735 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 VANGL2Q9ULK5 521 aa12.4□□□□□ -0.42
NEDD1-202ENST00000411739 A0A0A0MRY4 1105 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 SIGLEC16A6NMB1 481 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 CHRM1P11229 460 aaPredicted RBP12.39□□□□□ -0.43
NEDD1-202ENST00000411739 SDC4P31431 198 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 CCR3P51677 355 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 ZNF75DP51815 510 aa12.39□□□□□ -0.43
NEDD1-202ENST00000411739 NHLH1Q02575 133 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms