RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 SEC24AO95486 1093 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 TBX18O95935 607 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 VAV1P15498 845 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 LAG3P18627 525 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 STIP1P31948 543 aaKnown RBP18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 GLUD2P49448 558 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 BASP1P80723 227 aaKnown RBP18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 SMARCB1Q12824 385 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 MORF4L2Q15014 288 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 FAXCQ5TGI0 409 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 DENND2CQ68D51 928 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 UBE2Q1Q7Z7E8 422 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 ZCCHC9Q8N567 271 aaKnown RBP18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 C2orf15Q8WU43 125 aaKnown RBP18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 BADQ92934 168 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 SPATA17Q96L03 361 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 LGMNQ99538 433 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 HERC2P3Q9BVR0 1158 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 OXCT2Q9BYC2 517 aaPredicted RBP18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 HMGB1P1B2RPK0 211 aaPredicted RBP18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 EFCAB14O75071 495 aa18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 BAIAP3O94812 1187 aa18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 TMEM63AO94886 807 aa18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 RTN3O95197 1032 aaPredicted RBP18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 ACSL3O95573 720 aa18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 MOCS2O96007 188 aaPredicted RBP18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 NR2C2P49116 596 aa18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 DSG1Q02413 1049 aa18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 HP1BP3Q5SSJ5 553 aaPredicted RBP18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 NPWQ8N729 165 aa18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 CCDC110Q8TBZ0 833 aa18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 RTP4Q96DX8 246 aa18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 CAPS2Q9BXY5 557 aa18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 MCOLN1Q9GZU1 580 aa18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 SPG21Q9NZD8 308 aa18.14■□□□□ 0.49
LRPPRC-203ENST00000409946 CFAP69A5D8W1 941 aa18.13■□□□□ 0.49
LRPPRC-203ENST00000409946 PAGE1O75459 146 aa18.13■□□□□ 0.49
LRPPRC-203ENST00000409946 BANF1O75531 89 aa18.13■□□□□ 0.49
LRPPRC-203ENST00000409946 RPL10AP62906 217 aaKnown RBP18.13■□□□□ 0.49
LRPPRC-203ENST00000409946 EFEMP1Q12805 493 aa18.13■□□□□ 0.49
LRPPRC-203ENST00000409946 XRCC4Q13426 336 aa18.13■□□□□ 0.49
LRPPRC-203ENST00000409946 PAFAH1B3Q15102 231 aaKnown RBP18.13■□□□□ 0.49
LRPPRC-203ENST00000409946 KCTD16Q68DU8 428 aa18.13■□□□□ 0.49
LRPPRC-203ENST00000409946 MSANTD2Q6P1R3 559 aa18.13■□□□□ 0.49
LRPPRC-203ENST00000409946 PPIL6Q8IXY8 311 aa18.13■□□□□ 0.49
LRPPRC-203ENST00000409946 NAT8LQ8N9F0 302 aa18.13■□□□□ 0.49
LRPPRC-203ENST00000409946 C9orf72Q96LT7 481 aa18.13■□□□□ 0.49
LRPPRC-203ENST00000409946 RBM15Q96T37 977 aaKnown RBP eCLIP18.13■□□□□ 0.495e-6■■□□□ 11.5
LRPPRC-203ENST00000409946 NINJ2Q9NZG7 142 aa18.13■□□□□ 0.49
LRPPRC-203ENST00000409946 SHOC2Q9UQ13 582 aa18.13■□□□□ 0.49
LRPPRC-203ENST00000409946 SRGAP2BP0DMP2 458 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 EPHB2P29323 1055 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 CCR1P32246 355 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 IRAK1P51617 712 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 MTM1Q13496 603 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 FASTKD3Q14CZ7 662 aaKnown RBP18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 KYNUQ16719 465 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 BRMS1LQ5PSV4 323 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 ARHGAP18Q8N392 663 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 SH2D3CQ8N5H7 860 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 SERPINB11Q96P15 392 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 EPAS1Q99814 870 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 CENPHQ9H3R5 247 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 SAYSD1Q9NPB0 183 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 CXXC1Q9P0U4 656 aaPredicted RBP18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 NEU3Q9UQ49 428 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 DOCK4Q8N1I0 1966 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 ANAPC1Q9H1A4 1944 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 NUDT17P0C025 328 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 HCAR3P49019 387 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 IFFO1Q0D2I5 559 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 HEATR6Q6AI08 1181 aaKnown RBP18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 KDM7AQ6ZMT4 941 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 TRMT10CQ7L0Y3 403 aaKnown RBP18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 MIB1Q86YT6 1006 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 VPS52Q8N1B4 723 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 TFB1MQ8WVM0 346 aaKnown RBP18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 ATP6V1G3Q96LB4 118 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 PRDM12Q9H4Q4 367 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 TMBIM4Q9HC24 238 aa18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 TLR8Q9NR97 1041 aaKnown RBP18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 AFF4Q9UHB7 1163 aaKnown RBP18.12■□□□□ 0.49
LRPPRC-203ENST00000409946 NYNRINQ9P2P1 1898 aaKnown RBP18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 GOLGA6L10A6NI86 522 aa18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 F5H423 210 aaPredicted RBP18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 FGBP02675 491 aa18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 URODP06132 367 aa18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 AP1B1Q10567 949 aa18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 PPP2R5DQ14738 602 aa18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 C10orf120Q5SQS8 335 aa18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 FNBP1LQ5T0N5 605 aa18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 ARTNQ5T4W7 220 aa18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 RWDD4Q6NW29 188 aaKnown RBP18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 PCGF5Q86SE9 256 aa18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 DDX53Q86TM3 631 aaKnown RBP18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 DEPDC1BQ8WUY9 529 aa18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 FCRL2Q96LA5 508 aaPredicted RBP18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 CEP41Q9BYV8 373 aa18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 OSBPL2Q9H1P3 480 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms