RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SPOCD1Q6ZMY3 1216 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 NLRP14Q86W24 1093 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 P2RX7Q99572 595 aaKnown RBP8.61□□□□□ -1.03
SCN9A-203ENST00000409672 APBA2Q99767 749 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 SYT15Q9BQS2 421 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 SPATA31A6Q5VVP1 1343 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 ANKDD1BA6NHY2 528 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 HSPA14Q0VDF9 509 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 ATP6AP1LQ52LC2 224 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 FNDC5Q8NAU1 212 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 MOSPD2Q8NHP6 518 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 RNFT2Q96EX2 444 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 ZNF354BQ96LW1 612 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 LGMNQ99538 433 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 CNPY3Q9BT09 278 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 ACRP10323 421 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 CCT8P50990 548 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 CXCL9Q07325 125 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 VGLL4Q14135 290 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 AMZ1Q400G9 498 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 PPP2R2DQ66LE6 453 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 HHIPL2Q6UWX4 724 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 ISCA1Q9BUE6 129 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 ARMC7Q9H6L4 198 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 CTNNAL1Q9UBT7 734 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.6□□□□□ -1.03
SCN9A-203ENST00000409672 KLHL41O60662 606 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 PIRTP0C851 137 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 TFPIP10646 304 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 RANBP1P43487 201 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 SH3BGRP55822 239 aaPredicted RBP8.6□□□□□ -1.03
SCN9A-203ENST00000409672 SLC45A4Q5BKX6 768 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 FBXO38Q6PIJ6 1188 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 IL17RAQ96F46 866 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 MAML3Q96JK9 1138 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 PCDHB2Q9Y5E7 798 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 POLR1AO95602 1720 aaPredicted RBP8.6□□□□□ -1.03
SCN9A-203ENST00000409672 ABHD14A-ACY1A0A1B0GW23 586 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 NTRK1P04629 796 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 ZNF618Q5T7W0 954 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 MDM1Q8TC05 714 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 MCOLN3Q8TDD5 553 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 RXFP2Q8WXD0 754 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 TMEM176AQ96HP8 235 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 ZNF558Q96NG5 402 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 TKTL2Q9H0I9 626 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 VTA1Q9NP79 307 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 STMN3Q9NZ72 180 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 USP12O75317 370 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 MAPKAPK2P49137 400 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 MARC1Q5VT66 337 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 CACTIN-AS1Q8N1I8 211 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 AGBL3Q8NEM8 1001 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 RBBP8Q99708 897 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 TIPINQ9BVW5 301 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 ZNF624Q9P2J8 865 aaPredicted RBP8.6□□□□□ -1.03
SCN9A-203ENST00000409672 PSMD9O00233 223 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 PRMT3O60678 531 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 OR56A5P0C7T3 313 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 SCNN1GP51170 649 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 SMU1Q2TAY7 513 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 ACAD10Q6JQN1 1059 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 MANSC1Q9H8J5 431 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 ZCCHC17Q9NP64 241 aaKnown RBP8.6□□□□□ -1.03
SCN9A-203ENST00000409672 PCDH12Q9NPG4 1184 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 EQTNQ9NQ60 294 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.6□□□□□ -1.03
SCN9A-203ENST00000409672 RPAP1Q9BWH6 1393 aaPredicted RBP8.6□□□□□ -1.03
SCN9A-203ENST00000409672 A8MU76 341 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 CLDN5O00501 218 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 CHUKO15111 745 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 TSPAN8P19075 237 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 DNAJC3Q13217 504 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 KCTD19Q17RG1 926 aaPredicted RBP8.6□□□□□ -1.03
SCN9A-203ENST00000409672 KRT35Q92764 455 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 MARK4Q96L34 752 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 TRIM9Q9C026 710 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 PCDHGA3Q9Y5H0 932 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 TRIM49D1C9J1S8 452 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 ANXA5P08758 320 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 SNRPAP09012 282 aaKnown RBP8.6□□□□□ -1.03
SCN9A-203ENST00000409672 ABL2P42684 1182 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 RHAGQ02094 409 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 FMR1Q06787 632 aaKnown RBP eCLIP8.6□□□□□ -1.03
SCN9A-203ENST00000409672 MTAPQ13126 283 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 ITGADQ13349 1161 aa8.6□□□□□ -1.03
SCN9A-203ENST00000409672 TARBP2Q15633 366 aaKnown RBP8.6□□□□□ -1.03
SCN9A-203ENST00000409672 DDTLA6NHG4 134 aaPredicted RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 ENO4A6NNW6 628 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 B2RBV5 119 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 TRIM3O75382 744 aaPredicted RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 NPTX2P47972 431 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 PSMD8P48556 350 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 NAA30Q147X3 362 aaPredicted RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 ZC3H7AQ8IWR0 971 aaKnown RBP8.59□□□□□ -1.03
SCN9A-203ENST00000409672 GRID1Q9ULK0 1009 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 LAMC1P11047 1609 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 OGTO15294 1046 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 TGFB2P61812 414 aa8.59□□□□□ -1.03
SCN9A-203ENST00000409672 OTUD3Q5T2D3 398 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms