RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 IFNAR2P48551 515 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 LRRC14Q15048 493 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 SLC45A4Q5BKX6 768 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 RAB41Q5JT25 222 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 FAM72AQ5TYM5 149 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 BSPRYQ5W0U4 402 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 NCBP2-AS2Q69YL0 99 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 HEATR6Q6AI08 1181 aaKnown RBP4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 FAM72DQ6L9T8 149 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 LRRC8DQ7L1W4 858 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 TAX1BP1Q86VP1 789 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 NLRP14Q86W24 1093 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 FAM72BQ86X60 149 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 VSIG1Q86XK7 387 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 CEP57Q86XR8 500 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 SPATA2LQ8IUW3 424 aaPredicted RBP4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 CDKL3Q8IVW4 592 aaPredicted RBP4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 SCN4BQ8IWT1 228 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 SRRM1Q8IYB3 904 aaKnown RBP4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 ABI1Q8IZP0 508 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 CCNYQ8ND76 341 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 URGCPQ8TCY9 931 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 RNF34Q969K3 372 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 CCT8L2Q96SF2 557 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 LGMNQ99538 433 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 ETNK1Q9HBU6 452 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 CSNK1G1Q9HCP0 422 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 DMAP1Q9NPF5 467 aaPredicted RBP4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 ARHGEF4Q9NR80 690 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 INTS9Q9NV88 658 aaKnown RBP4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 TBC1D13Q9NVG8 400 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 PRDM4Q9UKN5 801 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 CHMP2BQ9UQN3 213 aa4.12□□□□□ -1.75
LRRTM4-201ENST00000409088 CLUHO75153 1309 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 ARHGEF37A1IGU5 675 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 GMNCA6NCL1 334 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 ZNF487B1APH4 448 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 EEF2KO00418 725 aaKnown RBP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 MFSD11O43934 449 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 TCEA3O75764 348 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 GNRH1P01148 92 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 AMHP03971 560 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 ABHD2P08910 425 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 BRAFP15056 766 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 SELPP16109 830 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 ELK3P41970 407 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 NR2C2P49116 596 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 GPX6P59796 221 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 FAM189BP81408 668 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 AP1B1Q10567 949 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 SF3A3Q12874 501 aaKnown RBP eCLIP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 ARHGEF6Q15052 776 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 SLC39A12Q504Y0 691 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 TNFAIP8L3Q5GJ75 292 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 ANKRD42Q8N9B4 389 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 SLC43A3Q8NBI5 491 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 TFB1MQ8WVM0 346 aaKnown RBP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 DYDC1Q8WWB3 177 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 XPO6Q96QU8 1125 aaKnown RBP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 CEP41Q9BYV8 373 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 KLC2Q9H0B6 622 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 WDCPQ9H6R7 721 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 WDR6Q9NNW5 1121 aaKnown RBP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 MLXIPLQ9NP71 852 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 ANLNQ9NQW6 1124 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 ABI2Q9NYB9 513 aaPredicted RBP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 SEPT10Q9P0V9 454 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 SNX10Q9Y5X0 201 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 TMEM120BA0PK00 339 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 RASA4BC9J798 803 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 I6L893 689 aaPredicted RBP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 EBAG9O00559 213 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 ENPP3O14638 875 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 RASA4O43374 803 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 TRAPPC3O43617 180 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 GFRA3O60609 400 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 NBNO60934 754 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 METTL18O95568 372 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 KRT15P19012 456 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 TYMPP19971 482 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 PHBP35232 272 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 GATMP50440 423 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 ARPP19P56211 112 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 YWHAGP61981 247 aaKnown RBP eCLIP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 DSC1Q08554 894 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 XRCC4Q13426 336 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 KCNJ11Q14654 390 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 MAPRE1Q15691 268 aaKnown RBP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 QPCTQ16769 361 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 ARL13BQ3SXY8 428 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 SDHAF4Q5VUM1 108 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 C4orf50Q6ZRC1 276 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 ARHGEF18Q6ZSZ5 1173 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 BZW1Q7L1Q6 419 aaKnown RBP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 BHLHA9Q7RTU4 235 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 PSTKQ8IV42 348 aaKnown RBP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 IGDCC3Q8IVU1 814 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 TP53INP2Q8IXH6 220 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms