RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 FAM72CH0Y354 149 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 DNM1LO00429 736 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 SNX3O60493 162 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 SNRPAP09012 282 aaKnown RBP12.9□□□□□ -0.34
ATG9A-203ENST00000409033 SLC10A2Q12908 348 aaPredicted RBP12.9□□□□□ -0.34
ATG9A-203ENST00000409033 PWP2Q15269 919 aaKnown RBP12.9□□□□□ -0.34
ATG9A-203ENST00000409033 CHI3L2Q15782 390 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 FAM72AQ5TYM5 149 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 FAM72DQ6L9T8 149 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 FAM72BQ86X60 149 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 ATPAF2Q8N5M1 289 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 URGCPQ8TCY9 931 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 EMID1Q96A84 441 aaPredicted RBP12.9□□□□□ -0.34
ATG9A-203ENST00000409033 TRIM55Q9BYV6 548 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 VANGL2Q9ULK5 521 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 RBBP6Q7Z6E9 1792 aaKnown RBP12.9□□□□□ -0.34
ATG9A-203ENST00000409033 RLFQ13129 1914 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 PIRO00625 290 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 IRF1P10914 325 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 RPL10AP62906 217 aaKnown RBP12.9□□□□□ -0.34
ATG9A-203ENST00000409033 SP3Q02447 781 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 SLC25A52Q3SY17 297 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 HSP90AA5PQ58FG0 334 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 NAT8LQ8N9F0 302 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 TRPV1Q8NER1 839 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 GIPC2Q8TF65 315 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 CKAP2Q8WWK9 683 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 RMDN2Q96LZ7 410 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 ZNF670Q9BS34 389 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 C20orf96Q9NUD7 363 aaPredicted RBP12.9□□□□□ -0.34
ATG9A-203ENST00000409033 ZFP69BQ9UJL9 534 aa12.9□□□□□ -0.34
ATG9A-203ENST00000409033 ZNF646O15015 1829 aaPredicted RBP12.89□□□□□ -0.35
ATG9A-203ENST00000409033 TCRBV5S1A1TA0A578 114 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 CBX6O95503 412 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 CHRNA1P02708 482 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 PGGT1BP53609 377 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 PRPSAP1Q14558 356 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 C10orf120Q5SQS8 335 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 MORN1Q5T089 497 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 NXNQ6DKJ4 435 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 AGMOQ6ZNB7 445 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 MANSC1Q9H8J5 431 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 RABGEF1Q9UJ41 708 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 C3orf70A6NLC5 250 aaPredicted RBP12.89□□□□□ -0.35
ATG9A-203ENST00000409033 C9IYK1 514 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 ENDOD1O94919 500 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 KCNA4P22459 653 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 DNAJB2P25686 324 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 ARFIP2P53365 341 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 GJA9P57773 515 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 GEN1Q17RS7 908 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 CTXN3Q4LDR2 81 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 MFSD5Q6N075 450 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 SLC26A11Q86WA9 606 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 GPATCH11Q8N954 259 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 MCUQ8NE86 351 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 MAGEB18Q96M61 343 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 SRPK1Q96SB4 655 aaKnown RBP12.89□□□□□ -0.35
ATG9A-203ENST00000409033 ACSS3Q9H6R3 686 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 ARMCX1Q9P291 453 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 TTC3P53804 2025 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 BUD23O43709 281 aaKnown RBP12.89□□□□□ -0.35
ATG9A-203ENST00000409033 SLC12A2P55011 1212 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 OR6P1Q8NGX9 317 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 AZIN2Q96A70 460 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 SMOQ99835 787 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 NCAPGQ9BPX3 1015 aa12.89□□□□□ -0.35
ATG9A-203ENST00000409033 ACTR5Q9H9F9 607 aaPredicted RBP12.89□□□□□ -0.35
ATG9A-203ENST00000409033 DMAP1Q9NPF5 467 aaPredicted RBP12.89□□□□□ -0.35
ATG9A-203ENST00000409033 RBM47A0AV96 593 aaKnown RBP12.88□□□□□ -0.35
ATG9A-203ENST00000409033 TP73O15350 636 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 SEPT4O43236 478 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 GATMP50440 423 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 MAXP61244 160 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 SNCBQ16143 134 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 SPDYCQ5MJ68 293 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 C17orf99Q6UX52 265 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 UNC5AQ6ZN44 842 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 CMC1Q7Z7K0 106 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 IFNLR1Q8IU57 520 aaPredicted RBP12.88□□□□□ -0.35
ATG9A-203ENST00000409033 LINC01465Q8N7H1 131 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 KLC4Q9NSK0 619 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 SENP1Q9P0U3 644 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 SLC45A1Q9Y2W3 748 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 GABBR2O75899 941 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 EZRP15311 586 aaKnown RBP12.88□□□□□ -0.35
ATG9A-203ENST00000409033 NFKB1P19838 968 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 ADRA1BP35368 520 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 GPR15P49685 360 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 GTF2A1P52655 376 aaPredicted RBP12.88□□□□□ -0.35
ATG9A-203ENST00000409033 ALDH18A1P54886 795 aaKnown RBP12.88□□□□□ -0.35
ATG9A-203ENST00000409033 KDSRQ06136 332 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 MTDHQ86UE4 582 aaKnown RBP12.88□□□□□ -0.35
ATG9A-203ENST00000409033 ZDHHC17Q8IUH5 632 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 PPP4R1Q8TF05 950 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 NSMCE1Q8WV22 266 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 ZNF75CPQ92670 426 aaPredicted RBP12.88□□□□□ -0.35
ATG9A-203ENST00000409033 SERAC1Q96JX3 654 aa12.88□□□□□ -0.35
ATG9A-203ENST00000409033 ZNF395Q9H8N7 513 aaPredicted RBP12.88□□□□□ -0.35
ATG9A-203ENST00000409033 SYBUQ9NX95 663 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms