RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 TTC16Q8NEE8 873 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 CLEC4CQ8WTT0 213 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 DEPDC1BQ8WUY9 529 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 CTNNBL1Q8WYA6 563 aaPredicted RBP10.99□□□□□ -0.65
RPAIN-204ENST00000405578 GATA6Q92908 595 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 ZNF653Q96CK0 615 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 LOXL4Q96JB6 756 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 SERPINB11Q96P15 392 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 CYP2S1Q96SQ9 504 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 ISCUQ9H1K1 167 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 TRPV5Q9NQA5 729 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 OSER1Q9NX31 292 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 SMPD4Q9NXE4 827 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.99□□□□□ -0.65
RPAIN-204ENST00000405578 TJP2Q9UDY2 1190 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 RASAL2Q9UJF2 1139 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 LSM7Q9UK45 103 aaKnown RBP10.99□□□□□ -0.65
RPAIN-204ENST00000405578 SH3BP1Q9Y3L3 701 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 HBS1LQ9Y450 684 aaKnown RBP10.99□□□□□ -0.65
RPAIN-204ENST00000405578 PAXBP1Q9Y5B6 917 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 CPQQ9Y646 472 aa10.99□□□□□ -0.65
RPAIN-204ENST00000405578 FAM170AA1A519 330 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 SIGLEC16A6NMB1 481 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 HEPACAM2A8MVW5 462 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 SLC9A3R1O14745 358 aaPredicted RBP10.98□□□□□ -0.65
RPAIN-204ENST00000405578 GRAP2O75791 330 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 TBX18O95935 607 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 H2AFZP0C0S5 128 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 PSMC3P17980 439 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 ABCB4P21439 1286 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 RRM1P23921 792 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 MPLP40238 635 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 MATKP42679 507 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 HARS2P49590 506 aaKnown RBP10.98□□□□□ -0.65
RPAIN-204ENST00000405578 MTA1Q13330 715 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 C2CD6Q53TS8 623 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 PLA2G2CQ5R387 149 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 TCEAL6Q6IPX3 200 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 MSANTD2Q6P1R3 559 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 H2AFVQ71UI9 128 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 BHLHA9Q7RTU4 235 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 KBTBD6Q86V97 674 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 DEFB106AQ8N104 65 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 KIAA1958Q8N8K9 716 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 BPIFB1Q8TDL5 484 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 SH3RF2Q8TEC5 729 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 USP13Q92995 863 aaPredicted RBP10.98□□□□□ -0.65
RPAIN-204ENST00000405578 TCEAL3Q969E4 200 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 SLC2A13Q96QE2 648 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 DCLK3Q9C098 648 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 RNF38Q9H0F5 515 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 FAM204AQ9H8W3 233 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 METTL5Q9NRN9 209 aaKnown RBP10.98□□□□□ -0.65
RPAIN-204ENST00000405578 TAS2R14Q9NYV8 317 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 CNOT8Q9UFF9 292 aaKnown RBP10.98□□□□□ -0.65
RPAIN-204ENST00000405578 SLC12A6Q9UHW9 1150 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 NUDT5Q9UKK9 219 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 WASF3Q9UPY6 502 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 NAALADL1Q9UQQ1 740 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 ZNF510Q9Y2H8 683 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 DMXL2Q8TDJ6 3036 aa10.98□□□□□ -0.65
RPAIN-204ENST00000405578 THADAQ6YHU6 1953 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 ASCC3Q8N3C0 2202 aaKnown RBP10.97□□□□□ -0.65
RPAIN-204ENST00000405578 SLC12A8A0AV02 714 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 LEFTY2O00292 366 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 ZNF263O14978 683 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 RPP40O75818 363 aaKnown RBP10.97□□□□□ -0.65
RPAIN-204ENST00000405578 PRAMEF12O95522 483 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 F9P00740 461 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 SLC2A3P11169 496 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 TCF3P15923 654 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 PDGFRAP16234 1089 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 FECHP22830 423 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 SDC4P31431 198 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 VIPR2P41587 438 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 SOX9P48436 509 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 PGFP49763 221 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 KRT83P78385 493 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 PTP4A2Q12974 167 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 NNTQ13423 1086 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 TAF5Q15542 800 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 ASTE1Q2TB18 679 aaPredicted RBP10.97□□□□□ -0.65
RPAIN-204ENST00000405578 SLC25A52Q3SY17 297 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 NUGGCQ68CJ6 796 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 PHLDB2Q86SQ0 1253 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 MFSD6LQ8IWD5 586 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 UNC45BQ8IWX7 931 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 CSGALNACT1Q8TDX6 532 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 DQX1Q8TE96 717 aaKnown RBP10.97□□□□□ -0.65
RPAIN-204ENST00000405578 GAB3Q8WWW8 586 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 RNF34Q969K3 372 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 PLD4Q96BZ4 506 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 SLC22A12Q96S37 553 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 EDEM2Q9BV94 578 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 SCNM1Q9BWG6 230 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 SMG9Q9H0W8 520 aaKnown RBP10.97□□□□□ -0.65
RPAIN-204ENST00000405578 SPTLC3Q9NUV7 552 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 DDIT4Q9NX09 232 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 CFAP97Q9P2B7 532 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 TBC1D14Q9P2M4 693 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms