RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 ACBD5Q5T8D3 534 aaPredicted RBP20.16■□□□□ 0.82
MAP1LC3A-203ENST00000397709 MEI1Q5TIA1 1274 aa20.16■□□□□ 0.82
MAP1LC3A-203ENST00000397709 MFSD6LQ8IWD5 586 aa20.16■□□□□ 0.82
MAP1LC3A-203ENST00000397709 PLCD3Q8N3E9 789 aa20.16■□□□□ 0.82
MAP1LC3A-203ENST00000397709 ST13P5Q8NFI4 369 aaPredicted RBP20.16■□□□□ 0.82
MAP1LC3A-203ENST00000397709 KRT35Q92764 455 aa20.16■□□□□ 0.82
MAP1LC3A-203ENST00000397709 RPGRIP1Q96KN7 1286 aa20.16■□□□□ 0.82
MAP1LC3A-203ENST00000397709 C1orf74Q96LT6 269 aa20.16■□□□□ 0.82
MAP1LC3A-203ENST00000397709 PRMT1Q99873 361 aaKnown RBP20.16■□□□□ 0.82
MAP1LC3A-203ENST00000397709 KXD1Q9BQD3 176 aa20.16■□□□□ 0.82
MAP1LC3A-203ENST00000397709 PLA2G2FQ9BZM2 168 aa20.16■□□□□ 0.82
MAP1LC3A-203ENST00000397709 GPATCH2LQ9NWQ4 482 aa20.16■□□□□ 0.82
MAP1LC3A-203ENST00000397709 PCDHA3Q9Y5H8 950 aa20.16■□□□□ 0.82
MAP1LC3A-203ENST00000397709 MIF4GDA9UHW6 222 aaKnown RBP20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 TNNT1P13805 278 aa20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 MARCKSL1P49006 195 aa20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 MLLT6P55198 1093 aaPredicted RBP20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 FCHO2Q0JRZ9 810 aa20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 DPYSL2Q16555 572 aa20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 ATP13A4Q4VNC1 1196 aa20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 ADGRF1Q5T601 910 aa20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 DEPDC1BQ8WUY9 529 aa20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 OSCP1Q8WVF1 389 aa20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 HSPH1Q92598 858 aa20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 HES6Q96HZ4 224 aa20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 KCTD15Q96SI1 283 aaPredicted RBP20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 MAGEB5Q9BZ81 275 aa20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 TBC1D14Q9P2M4 693 aa20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 PACSIN2Q9UNF0 486 aaPredicted RBP20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 SNX10Q9Y5X0 201 aa20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 NUMBLQ9Y6R0 609 aa20.15■□□□□ 0.82
MAP1LC3A-203ENST00000397709 COL6A3P12111 3177 aa20.14■□□□□ 0.82
MAP1LC3A-203ENST00000397709 GOLGA6L7A0A1B0GV03 622 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 CCDC66A2RUB6 948 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 LOC730098B7Z3J9 87 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 GFRA2O00451 464 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 SLC9A3R1O14745 358 aaPredicted RBP20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 DDX3YO15523 660 aaKnown RBP20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 TACR2P21452 398 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 MSNP26038 577 aaKnown RBP20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 SLC6A4P31645 630 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 PEX5P50542 639 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ARSEP51690 589 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 GNG11P61952 73 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 SEMA3BQ13214 749 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ARTNQ5T4W7 220 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 RAP1GAP2Q684P5 730 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 NYAP1Q6ZVC0 841 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 CHSY1Q86X52 802 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 KATNAL2Q8IYT4 538 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ZNF683Q8IZ20 524 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 PYROXD2Q8N2H3 581 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 CPXM2Q8N436 756 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 FAM71BQ8TC56 605 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 OTUB2Q96DC9 234 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 DDX50Q9BQ39 737 aaKnown RBP20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 RPP25Q9BUL9 199 aaKnown RBP20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 SIK2Q9H0K1 926 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 DHX35Q9H5Z1 703 aaKnown RBP20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 DDX56Q9NY93 547 aaKnown RBP20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 PRKAG3Q9UGI9 489 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 WNT6Q9Y6F9 365 aa20.14■□□□□ 0.81
MAP1LC3A-203ENST00000397709 FAM72CH0Y354 149 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 PSMC3P17980 439 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 L1CAMP32004 1257 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 GGCXP38435 758 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 AUHQ13825 339 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 FAM72AQ5TYM5 149 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 MANEALQ5VSG8 457 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 FAM72DQ6L9T8 149 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 C14orf80Q86SX3 495 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 FAM72BQ86X60 149 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 UBL4BQ8N7F7 174 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 NXPE3Q969Y0 559 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ASIC4Q96FT7 647 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 TLR10Q9BXR5 811 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 PCDH18Q9HCL0 1135 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 KLHL11Q9NVR0 708 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 THG1LQ9NWX6 298 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 DUS2Q9NX74 493 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 OR12D3Q9UGF7 316 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 JRKLQ9Y4A0 524 aa20.13■□□□□ 0.81
MAP1LC3A-203ENST00000397709 KRT1P04264 644 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 CHKAP35790 457 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 IFNAR2P48551 515 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 RPS6KA1Q15418 735 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 EML3Q32P44 896 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 C5orf22Q49AR2 442 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 FBXL22Q6P050 247 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ADHFE1Q8IWW8 467 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ATXN2LQ8WWM7 1075 aaKnown RBP20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 RAPGEF5Q92565 580 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 TSC1Q92574 1164 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ALG3Q92685 438 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 MYEOVQ96EZ4 313 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 WDR24Q96S15 920 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 FAM83CQ9BQN1 747 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 LINC00597Q9H2U6 94 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms