RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 AP5M1Q9H0R1 490 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 SNX25Q9H3E2 840 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 PLAC1Q9HBJ0 212 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 ARNT2Q9HBZ2 717 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 DNAJC28Q9NX36 388 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 STK39Q9UEW8 545 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 DCDC2Q9UHG0 476 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 IPPQ9Y573 584 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 RECQL4O94761 1208 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 PAPSS2O95340 614 aaPredicted RBP6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 CCNCP24863 283 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 GRK2P25098 689 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 GBP2P32456 591 aaPredicted RBP6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 MSH2P43246 934 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 DAOAP59103 153 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 NCALDP61601 193 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 GALNT1Q10472 559 aaPredicted RBP6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 LONRF1Q17RB8 773 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 SNX30Q5VWJ9 437 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 TRIM50Q86XT4 487 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 UNC45BQ8IWX7 931 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 KCTD15Q96SI1 283 aaPredicted RBP6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 GBA3Q9H227 469 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 ATP13A1Q9HD20 1204 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 SLC40A1Q9NP59 571 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 KLC4Q9NSK0 619 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 HMGXB4Q9UGU5 601 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 VPS28Q9UK41 221 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 AP4E1Q9UPM8 1137 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 EP400Q96L91 3159 aa6.2□□□□□ -1.42
RAPGEF4-203ENST00000397087 DYTNA2CJ06 578 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 A8MXQ7 604 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 MAGEC1O60732 1142 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 HUS1O60921 280 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 GLRA3O75311 464 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 ITGBL1O95965 494 aaPredicted RBP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 TROVE2P10155 538 aaKnown RBP eCLIP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 ODC1P11926 461 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 NQO1P15559 274 aaKnown RBP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 TCF4P15884 667 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 LILRA4P59901 499 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 OSTNP61366 133 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 KRT81Q14533 505 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 SEPT7Q16181 437 aaKnown RBP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 MAP3K21Q5TCX8 1036 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 METTL21CQ5VZV1 264 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 TXNRD3NBQ6F5E7 133 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 CLEC14AQ86T13 490 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 TMEM135Q86UB9 458 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 ZNF598Q86UK7 904 aaKnown RBP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 KIAA1958Q8N8K9 716 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 FBXO36Q8NEA4 188 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 COPS5Q92905 334 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 SUSD3Q96L08 255 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 C8orf48Q96LL4 319 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 CDK5RAP1Q96SZ6 601 aaKnown RBP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 SMOC2Q9H3U7 446 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 POPDC3Q9HBV1 291 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 PLLPQ9Y342 182 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 TLL2Q9Y6L7 1015 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 NYNRINQ9P2P1 1898 aaKnown RBP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 HELZP42694 1942 aaKnown RBP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 F8W8V4 182 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 AP2A1O95782 977 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 LATS1O95835 1130 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 PTPN1P18031 435 aaKnown RBP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 YY1P25490 414 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 RAP1GDS1P52306 607 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 CDH6P55285 790 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 BCAR1P56945 870 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 DYNLT1P63172 113 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 ELF3P78545 371 aaPredicted RBP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 MPP2Q14168 576 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 CTC1Q2NKJ3 1217 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 RNF165Q6ZSG1 346 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 PAQR9Q6ZVX9 377 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 NLRP9Q7RTR0 991 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 CATSPER4Q7RTX7 472 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 PACS2Q86VP3 889 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 PARP9Q8IXQ6 854 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 CYP4X1Q8N118 509 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 GIMAP7Q8NHV1 300 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 HTR3CQ8WXA8 447 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 ACSF2Q96CM8 615 aaPredicted RBP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 SPATA17Q96L03 361 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 SYNCQ9H7C4 482 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 WDR6Q9NNW5 1121 aaKnown RBP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 IGLV3-10A0A075B6K4 115 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 TCRBV9S1A1TA0A576 114 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 DNM1LO00429 736 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 PTGESO14684 152 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 SYN3O14994 580 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 PIM1P11309 404 aaPredicted RBP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 HNRNPH1P31943 449 aaKnown RBP6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 ARL4AP40617 200 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 CDC16Q13042 620 aa6.19□□□□□ -1.42
RAPGEF4-203ENST00000397087 DSG2Q14126 1118 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms