RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 ACACAQ13085 2346 aa13.86□□□□□ -0.19
RPA3-202ENST00000396682 O00370 1275 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 CETN3O15182 167 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 STX10O60499 249 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 ZNF883P0CG24 379 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 ACADMP11310 421 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 ACSL1P33121 698 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 HARS2P49590 506 aaKnown RBP13.85□□□□□ -0.19
RPA3-202ENST00000396682 PMS1P54277 932 aaKnown RBP13.85□□□□□ -0.19
RPA3-202ENST00000396682 SLC8A3P57103 927 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 BST2Q10589 180 aaKnown RBP13.85□□□□□ -0.19
RPA3-202ENST00000396682 COL9A2Q14055 689 aaPredicted RBP13.85□□□□□ -0.19
RPA3-202ENST00000396682 PKDCCQ504Y2 493 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 SGO2Q562F6 1265 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 DCAF17Q5H9S7 520 aaPredicted RBP13.85□□□□□ -0.19
RPA3-202ENST00000396682 LRSAM1Q6UWE0 723 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 CCNI2Q6ZMN8 369 aaPredicted RBP13.85□□□□□ -0.19
RPA3-202ENST00000396682 DBX2Q6ZNG2 339 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 CHST9Q7L1S5 443 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.85□□□□□ -0.19
RPA3-202ENST00000396682 UBA3Q8TBC4 463 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 WFDC5Q8TCV5 224 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 SETD7Q8WTS6 366 aaKnown RBP13.85□□□□□ -0.19
RPA3-202ENST00000396682 LRRC4Q9HBW1 653 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 TM7SF3Q9NS93 570 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 OLA1Q9NTK5 396 aaKnown RBP13.85□□□□□ -0.19
RPA3-202ENST00000396682 ABCB8Q9NUT2 735 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 TOR4AQ9NXH8 423 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 LHX6Q9UPM6 363 aa13.85□□□□□ -0.19
RPA3-202ENST00000396682 SMG1Q96Q15 3661 aaKnown RBP13.85□□□□□ -0.19
RPA3-202ENST00000396682 TMEM131Q92545 1883 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 A0A1B0GVT2 93 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 CER1O95813 267 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 CD19P15391 556 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 MATKP42679 507 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 PRCPP42785 496 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 CSNK1EP49674 416 aaKnown RBP13.84□□□□□ -0.19
RPA3-202ENST00000396682 ARID5AQ03989 594 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 PNOCQ13519 176 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 E2F5Q15329 346 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 KIF19Q2TAC6 998 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 FNDC3BQ53EP0 1204 aaKnown RBP13.84□□□□□ -0.19
RPA3-202ENST00000396682 ADGRF1Q5T601 910 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 TCERG1LQ5VWI1 586 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 KCTD13Q8WZ19 329 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 TFAP2BQ92481 460 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 TMA16Q96EY4 203 aaKnown RBP13.84□□□□□ -0.19
RPA3-202ENST00000396682 IPO9Q96P70 1041 aaKnown RBP13.84□□□□□ -0.19
RPA3-202ENST00000396682 PCED1AQ9H1Q7 454 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 LHX5Q9H2C1 402 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 GDPD2Q9HCC8 539 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 PRSS16Q9NQE7 514 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 GGA2Q9UJY4 613 aa13.84□□□□□ -0.19
RPA3-202ENST00000396682 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.84□□□□□ -0.19
RPA3-202ENST00000396682 GOLGA6L7A0A1B0GV03 622 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 SLC16A3O15427 465 aaKnown RBP13.83□□□□□ -0.2
RPA3-202ENST00000396682 DKK1O94907 266 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 LATS1O95835 1130 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 IGLV3-27P01718 113 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 VDRP11473 427 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 PABPC1P11940 636 aaKnown RBP13.83□□□□□ -0.2
RPA3-202ENST00000396682 SLC6A4P31645 630 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 CD70P32970 193 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 DAOAP59103 153 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 ZNF445P59923 1031 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 RPS14P62263 151 aaKnown RBP13.83□□□□□ -0.2
RPA3-202ENST00000396682 FAM133BQ5BKY9 247 aaKnown RBP13.83□□□□□ -0.2
RPA3-202ENST00000396682 ANKRD40Q6AI12 368 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 MSANTD2Q6P1R3 559 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 RFWD3Q6PCD5 774 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 IL27RAQ6UWB1 636 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 LAYNQ6UX15 382 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 AHI1Q8N157 1196 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 SIX6OS1Q8N1H7 587 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 SCML4Q8N228 414 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 WFIKKN2Q8TEU8 576 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 RNF139Q8WU17 664 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 SNX19Q92543 992 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 SLC35C1Q96A29 364 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 LMLNQ96KR4 655 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 ZSWIM1Q9BR11 485 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 ORAI3Q9BRQ5 295 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 SCAND2PQ9GZW5 306 aaPredicted RBP13.83□□□□□ -0.2
RPA3-202ENST00000396682 CNGB3Q9NQW8 809 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 ABCC13Q9NSE7 274 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 HESX1Q9UBX0 185 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 APOBEC2Q9Y235 224 aaKnown RBP13.83□□□□□ -0.2
RPA3-202ENST00000396682 BTBD3Q9Y2F9 522 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 GPSM3Q9Y4H4 160 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 SNX11Q9Y5W9 270 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 ADAMTS20P59510 1910 aa13.83□□□□□ -0.2
RPA3-202ENST00000396682 TRIM49BA6NDI0 452 aa13.82□□□□□ -0.2
RPA3-202ENST00000396682 PIK3R2O00459 728 aa13.82□□□□□ -0.2
RPA3-202ENST00000396682 DLDP09622 509 aaKnown RBP13.82□□□□□ -0.2
RPA3-202ENST00000396682 ATXN1LP0C7T5 689 aaKnown RBP13.82□□□□□ -0.2
RPA3-202ENST00000396682 SETSIPP0DME0 302 aa13.82□□□□□ -0.2
RPA3-202ENST00000396682 LCP1P13796 627 aa13.82□□□□□ -0.2
RPA3-202ENST00000396682 RGS7P49802 495 aa13.82□□□□□ -0.2
RPA3-202ENST00000396682 AFF3P51826 1226 aaKnown RBP13.82□□□□□ -0.2
RPA3-202ENST00000396682 LRMPQ12912 555 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms